Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02008 ATGGCAACATCCTTGTCCACAACTAGTATGCTTTCATGGAGGAATCCGCAGCACATGCATTTTCCACCCTCTTCACAAACACTTTGCCACTCTTCAGTCCGAAATGGAATTCTAAGAACTGTAGCTGCTTCAGTGTCAAAAGAAACTTGTTTGAGTAACGGAGACAGCGAGAAATGTTCCTCTTTGTTGATGAATAGAAGAGCAGTTTTGGCTTCTGCAGTTTCCTTGTTGGGTTTTCCAGGGGAGAGTATGGCTGTGGTGAAACAAGGTCTTCTAGCAGGGAGGGTTCCTGGCCTGTCCGAGCCAGATGAACAAGGTTGGAGGACATATCGCAGGCCAGATGAGAAGTCAGGAGGACATGGTGTTGGATGGAGTCCTATTATCCCATACACCTTCTCAGTGCCTCAGGATTGGGAAGAGGTACCGGTATCAATAGCAGATCTCGGTGGGACGGAGATAGATTTGAGATTTGCCAGCTCTAAGGAAGGACGTTTGTTTGTCATTGTTGCTCCTGTTCTTAGATTCTCTGATAATCTTGGTGATAATGCTACAATAGAAAAAATCGGACCTCCAGACAAAGTGATCAATGCGTTTGGTCCGGAAGTGATTGGGGAAAATGTTGAAGGGAAGGTTCTTAGTGCAAGTGTAGCAGAACATGAAGGAAGAACTTACTACCAGTTTGAGCTAGAGCCTCCTCATGTTTTTATTACTGCCACTGCAGCTGGCAATCGCCTATACTTGTTTGGTGTAACTGGCAGTGGCCTTCAGTGGAAGAGACACTACAATGATTTGAAGAAGATAGCTGACTCTTTTCGAGTTGTATAA 825 0.4509 MATSLSTTSMLSWRNPQHMHFPPSSQTLCHSSVRNGILRTVAASVSKETCLSNGDSEKCSSLLMNRRAVLASAVSLLGFPGESMAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYTFSVPQDWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDNLGDNATIEKIGPPDKVINAFGPEVIGENVEGKVLSASVAEHEGRTYYQFELEPPHVFITATAAGNRLYLFGVTGSGLQWKRHYNDLKKIADSFRVV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02008 274 SUPERFAMILY Mog1p/PsbP-like 122 273 IPR016123 -
Rops10g02008 274 PANTHER - 13 273 - -
Rops10g02008 274 Pfam PsbP 130 273 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Rops10g02008 274 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 127 274 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02008 - - pvu:PHAVU_009G134500g 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02008 10 36616989 36619437 Rops10g02008 10 36616989 36619437 ECH