Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02006 ATGGATGTTGCCCATTTTTTGTTTGGCATATTTGGGAATGTTTCCGCTCTGTTCCTCTTCTTGGCTCCAGTGATAACATTCAAGAGGATTATAGTCCATAGATCCACAGAGAAGTTCTCGGGCATTCCATATGTTATGACACTGCTCAATTGTCTCCTTTCTGCTTGGTATGGTTTGCCTTTTGTGTCTCCCCACAACATACTAGTATCAACAGTGAATGGGACAGGTTCAGTGATCGAAATCATATACGTTGTGATCTTCATCATATTTGCACCCAGAAAGGAGAAGGCTAAAATTCTTGGCCTCTTTACCTTTGTACTCTCGGTTTTCTCCGCTGTTGTGTTCGTGTCTCTTTTTGCCCTGCATGGCAATTCCAGGAAGATCTTTTGCGGCTTCGCTGCCTCCATATTTTCCATAGTCATGTATGGTTCACCACTCTCAATTATGAGACTAGTGATCAAAACTAAGAGTGTGGAGTTCATGCCCTTCTTCTTGTCGCTATTTGTGTTCCTCTGCGGCACTTCCTGGTTTATCTTCGGTCTGCTAGGCCGTGACCCATTTGTTGCTGTACCTAATGGTGTTGGTTCTGCTTTGGGAACAATGCAACTGATACTGTATTTCATTTATCGTGACAAGAAAGGTGCTCCGAAGAAGCGGGCCCCAACAGAGGAAGAAATCATGGAGATGGGTGATGTAAAATCCCATCAAGGGAATCAATCAAATGCAAATGGAAGTTAA 738 0.4336 MDVAHFLFGIFGNVSALFLFLAPVITFKRIIVHRSTEKFSGIPYVMTLLNCLLSAWYGLPFVSPHNILVSTVNGTGSVIEIIYVVIFIIFAPRKEKAKILGLFTFVLSVFSAVVFVSLFALHGNSRKIFCGFAASIFSIVMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGLLGRDPFVAVPNGVGSALGTMQLILYFIYRDKKGAPKKRAPTEEEIMEMGDVKSHQGNQSNANGS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02006 245 MobiDBLite consensus disorder prediction 214 245 - -
Rops10g02006 245 Gene3D - 127 219 - -
Rops10g02006 245 PANTHER RAG1-ACTIVATING PROTEIN 1 14 218 IPR047664 -
Rops10g02006 245 Gene3D - 7 96 - -
Rops10g02006 245 FunFam Bidirectional sugar transporter SWEET 126 219 - -
Rops10g02006 245 FunFam Bidirectional sugar transporter SWEET 7 97 - -
Rops10g02006 245 Pfam Sugar efflux transporter for intercellular exchange 131 213 IPR004316 GO:0016020
Rops10g02006 245 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016020
Rops10g02006 245 MobiDBLite consensus disorder prediction 214 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02006 Rops-Chr10 36582518 36585682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02006 1 190 Miscellaneous Gene Families AT1G21460 75.263 2.24e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02006 K15382 - gmx:100800304 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02006 10 36582518 36585682 Rops10g02006 10 36582518 36585682 ECH