Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01997 ATGGAGGTGGAAGTACCTGTTGTGATCGTAGGTGCAGGCCCTGCTGGCTTAGCAACCTCTGGATGTCTTAACAAGCTTTCCATTCCCAACCTTGTGTTAGAAAGAGATGATTGTCATGCATCTCTTTGGAGGAAAAGAACCTATGACCGCTTAAAGCTTCACCTTGGCAAAGATTTCTGTAACCTCCCTCATTTTCCTTTCCCATCTGATGCACCAACCTTTGTCCCTAGGGTTGAATTCTTACGCTACTTAGATAGCTATGTGAACCATTTTAAGATTTGCATCCGTTACAACCGATCTGTTGAGTCTGCCTCTTTTGATAACAACAACCAGAAATGGAGGCTTGTTGTGAAGGACTCATCATCAAATGTTGATGAGGTTTATGTTGCTGATTATCTTGTGGTTGCAACTGGGGAGAATAATGAAGGGTACATTCCCAGGATTGATGGGCTTAAAATTTTTGAAGGAGAATACTTGCATTGCAGTGAATATCTGAATGGAAGACCATGGTATGATAAAAATGTCTTGGTTGTTGGTTGTGGTAATTCTGGCATGGAGATCGCTTATGATCTCTCAAATTGGGGTGCAAATACCTCCATTGTTGTTAGAAGCCCTGTGCACTTTTTTACTAAAGAAATGATTTTCATGGGAATGCATTTGCTGAAATACTTCAAAGTGGAGAAGGTGGACAAGTTAATGGTGCTTATGAGCAAAATGATGTATGGTGATATGTCCAAGTTCGGGTTGATCAGACCAGAGGATGGACCCTTTGTTATGAAAATTAAGGGTGGTCGTACGCCGACCATTGATGTGGGTTGCGTGAAGAAGATTAAGAAAGGCAAAATAAAGGTTTTCCCAGCTATTTCAAGCATCAAAGAAAACAAGATAGTTGAGTTTGCAGATGGACAAAATGGTCAATTTGACGTTATTATCTTTGCTACCGGATACAAGACCAATGTGCTGAAGTGGCTTAAGGATTACAAAGAGTTGTTCAATGAGAATGGAATGCCTAAGCCAAGTTTTCCAAATCACTGGAAAGGAGAAAATGGCATATACTGCGCTGGATTTTCAAAAAGGGGATTAGAAGGCATTGCTTTTGATGCGCAGAAAATAGCAAATGATATCAGTCTGACCGTGAATGCAAAGAAGATACCCAGTGCAGGGACCAATGCTTGA 1176 0.409 MEVEVPVVIVGAGPAGLATSGCLNKLSIPNLVLERDDCHASLWRKRTYDRLKLHLGKDFCNLPHFPFPSDAPTFVPRVEFLRYLDSYVNHFKICIRYNRSVESASFDNNNQKWRLVVKDSSSNVDEVYVADYLVVATGENNEGYIPRIDGLKIFEGEYLHCSEYLNGRPWYDKNVLVVGCGNSGMEIAYDLSNWGANTSIVVRSPVHFFTKEMIFMGMHLLKYFKVEKVDKLMVLMSKMMYGDMSKFGLIRPEDGPFVMKIKGGRTPTIDVGCVKKIKKGKIKVFPAISSIKENKIVEFADGQNGQFDVIIFATGYKTNVLKWLKDYKELFNENGMPKPSFPNHWKGENGIYCAGFSKRGLEGIAFDAQKIANDISLTVNAKKIPSAGTNA* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01997 391 PRINTS Pyridine nucleotide disulphide reductase class-I signature 133 142 - -
Rops10g01997 391 PRINTS Pyridine nucleotide disulphide reductase class-I signature 6 28 - -
Rops10g01997 391 PRINTS Pyridine nucleotide disulphide reductase class-I signature 174 199 - -
Rops10g01997 391 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Rops10g01997 391 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Rops10g01997 391 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 6 379 - -
Rops10g01997 391 Pfam Flavin-binding monooxygenase-like 7 318 IPR020946 GO:0004499|GO:0050660|GO:0050661
Rops10g01997 391 Gene3D - 3 384 IPR036188 -
Rops10g01997 391 SUPERFAMILY FAD/NAD(P)-binding domain 7 280 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01997 Rops-Chr10 36435300 36437541 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01997 K11816 - gmx:100801203 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01997 10 36435300 36437541 Rops10g01997 10 36435300 36437541 ECH