Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01947 ATGGCATTCTCCGCCACCTGCGCCAATGCCAGAATCTTGGCTTTTCGGTTCGAATTGCAGAGGAAGAAGAAGAAGAAGCCTTGTCTCCGCAAAACACACCTCCTCAGAGCCCAACTCTCCAACTCTTTTTCCTTAAACTTCGGATTGGATTCTAAGAGCTTGAAGTCCATTCAATCCCATGATCCAACACGTTTGCCTTGGATGGGTCCAGTTCCAGGTGATATTGCTGAAGTGGAAGCATATTGTAGGATCTTTAGGAATTCTGAAAGGCTTCATTCTGCTTTAATGGATGCTTTGTGTAATCCATTCACTGGTGAATGTAGTGTTTCATATGAGGTTCCCTCTGATGAGAAACCCCTTCTAGAAGATAAGATAGTTTCTGTCCTTGGATGCATGATATCCCTTGTGAACAATGGAAGGGAGGATGTTCTTTCTGGAAGATTTTCCATTGTGACTCCCTTCCGTGCTGCTGGGGTAAGCACTGTGGAGGAAACCCTCCCTCCACTCGCTTTTTTCAGGAGTGAGATGAAGAGGTGTTGTGAGAGCTTGCATGTTGCTCTTGAGAATTATTTGATTCCTGGTGATGATCAAAGCTTGGATGTGTGGAGGAAACTTCAGAGACTGAAGAATGTCTGCTATGATTCCGGTTTTCCTCGCAGGGAGGATTATCCATGTCCGGAACTATTTGCGAATTGGAGTCCTGTATATTTATCCACTTCCAAAGAGGATGCGGAGTCTAAAGAATCTGAGGCAGCATTTTGGACAGGTGGGCAGGTAACAGAAGAAGGCCTGGAGTGGTTAGTGGATAAAGGATTTAAAACTATTGTAGATCTAAGAGAAGATACTGTAAAAGATAACTTCTATGAAGCAGCTGTGCATGATTCTATCTCATCTGGAAGTATTGAATTGGTCAAAATCCCTGTTGAAGTTAGGACTGCACCTACAATGGAACAAGTTGAGAGGTTTGCATCTTATGTTTCAGATTGCAGCAAAAGGCCGATCTATCTTCATAGCAAGGAAGGAGTTTGGAGAACATCTTCCATGGTCTCCAGATGGAGGCAGCACATGACTCGCTCTGCATCACAGTATGTTTCCAATCAAGCAACTATTTCCCATGACATGTTATTGAATTATACAAATGGATCTGGGAAACTGCAGGACTCAGTGATTGCTGTGAAATCCTCCCTGGAAAAAGATACTAATTTGTTGCATGAGAGTTTGGGTGAAACACATAGTTCTGTTGAAACATTTGACAAAAGTGCCTCTCAAAAGAAGAATAATGAAAAATCGCAAAGTAATGGGGCCTTAGGTGGAATTATTCCTGACGATAAAACTTCATCACAAGCCACAGCTGCTAATGGGGAAGGATCTTTTCCAAGTTTCTTTGGTAAAACTAGCCCTTTAAAAGCTCAAATTCCTCCTTGTGATATCTTTTCCAAAAAAGAGATGTCCAGATTTTGGGGAAGTAGGAAGATCCCAAAACCCTCTTATTTAAGTTATCAAGTTAAAAGGTTGGAAAACATGCCAGATTCAAGGAACATGCATACTGGAAGACTGCAGGGGGGATTGATAATCAGCAGTGGTGATAATCCTGAACCTAAAATTGTGGGTCCAGCAGAAAGTTACAATGGGCCAGCTCATGTGGATTATCCATTGGGGGAGCCCCAGATTACAGTTGGTAGCAAATGGAAGTTGGTGAATATGAATACTTCCAGTTCTGTTAGGACAACATTTAATGGGATTAGTGAAGGGGAAATGTGTAACATAACTAATGCAGATGTCTCTACCGCAGTGAACAACGACATTGATAATGTCACAGCTAACTCTCAAAGGAATGGCGATGTTGAGGATAAGACTGGGTCATCCTTATGTGATGAAGAATCGGGACTCATTGAAGGAGACATGTGTGCATCCTCAATGGGAGTTGTGAGATTGCAGTCAAGAAAGAAAGCAGAGATGTTCGTAGTACGAACGGATGGAATTTCTTGTGCCAGAGAAAAGGTGAATGAATCTTCTTTGGCCTTCACTCATCCTAGCACCCAGCAACAGATGCTTATGTGGAAATCTACACCAAAGACTGTGTTACTGTTGAAAAAACCGGGGGAACAACTCATGGAAGAAGCTAAAGAGGTTGCTTCTTTTCTATATTACCAAGAGAAAATGAACGTTTTCGTGGAACCTGATGTGCATGATATATTTGCTAGAATTCCCGGGTTTGGATTTGTTCAGACCTTCTATAGTCAAGATATTTGTGATCTACATGAGAAAGTAGATTTGGTGGCATGTTTGGGGGGAGATGGTGTTATACTGCATGCTTCAAATCTATTCAGAGGTGCTGTCCCCCCTATTGTGTCATTTAACCTTGGTTCCCTTGGTTTTCTGACTTCTCATAATTTTGAAGACTACAAGCAGGACTTACGACAAGTCATCCATGGAAATAATACACGAGATGGTGTGTACATCACTCTCAGAATGCGTCTCCGATGTGAAATTTTTCGCAAGGGTAAAGCCATGCCAGGGAAAATATTTGATATTCTCAATGAGGTTGTTGTTGATCGGGGTTCCAATCCATATCTTTCAAAGATTGAATGTTATGAACGTGATAGACTTATAACCAAGGTACAAGGTGATGGAGTAATCGTGGCCACCCCTACTGGAAGCACTGCCTATTCTACAGCTGCTGGAGGTTCCATGGTCCATCCAAACGTTCCCTGCATGCTGTTTACCCCAATCTGTCCGCATTCACTGTCATTTAGACCAGTTATACTTCCAGATTCTGCTCAACTTGAATTAAAGATTCCAGAGGATGCAAGAAGCAATGCCTGGGTTTCATTTGATGGGAAGAGAAGGCAGCAACTTTCAAGAGGAGATTCTGTACGAATATCTATGAGTCAGCATCCGCTTCCAACAGTTAACAAATTTGACCAAACAGGTGATTGGTTTCATAGCTTGATTCGCTGCCTAAATTGGAATGAAAGGCTCGACCAAAAGGCTCTATAG 3000 0.4223 MAFSATCANARILAFRFELQRKKKKKPCLRKTHLLRAQLSNSFSLNFGLDSKSLKSIQSHDPTRLPWMGPVPGDIAEVEAYCRIFRNSERLHSALMDALCNPFTGECSVSYEVPSDEKPLLEDKIVSVLGCMISLVNNGREDVLSGRFSIVTPFRAAGVSTVEETLPPLAFFRSEMKRCCESLHVALENYLIPGDDQSLDVWRKLQRLKNVCYDSGFPRREDYPCPELFANWSPVYLSTSKEDAESKESEAAFWTGGQVTEEGLEWLVDKGFKTIVDLREDTVKDNFYEAAVHDSISSGSIELVKIPVEVRTAPTMEQVERFASYVSDCSKRPIYLHSKEGVWRTSSMVSRWRQHMTRSASQYVSNQATISHDMLLNYTNGSGKLQDSVIAVKSSLEKDTNLLHESLGETHSSVETFDKSASQKKNNEKSQSNGALGGIIPDDKTSSQATAANGEGSFPSFFGKTSPLKAQIPPCDIFSKKEMSRFWGSRKIPKPSYLSYQVKRLENMPDSRNMHTGRLQGGLIISSGDNPEPKIVGPAESYNGPAHVDYPLGEPQITVGSKWKLVNMNTSSSVRTTFNGISEGEMCNITNADVSTAVNNDIDNVTANSQRNGDVEDKTGSSLCDEESGLIEGDMCASSMGVVRLQSRKKAEMFVVRTDGISCAREKVNESSLAFTHPSTQQQMLMWKSTPKTVLLLKKPGEQLMEEAKEVASFLYYQEKMNVFVEPDVHDIFARIPGFGFVQTFYSQDICDLHEKVDLVACLGGDGVILHASNLFRGAVPPIVSFNLGSLGFLTSHNFEDYKQDLRQVIHGNNTRDGVYITLRMRLRCEIFRKGKAMPGKIFDILNEVVVDRGSNPYLSKIECYERDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01947 999 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 695 994 IPR016064 -
Rops10g01947 999 Gene3D Protein tyrosine phosphatase superfamily 244 378 IPR029021 -
Rops10g01947 999 Hamap NAD kinase [nadK]. 692 990 IPR002504 GO:0003951|GO:0006741
Rops10g01947 999 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 253 361 IPR029021 -
Rops10g01947 999 MobiDBLite consensus disorder prediction 406 434 - -
Rops10g01947 999 FunFam NAD kinase 2, chloroplastic 681 845 - -
Rops10g01947 999 Gene3D - 681 991 IPR017438 -
Rops10g01947 999 PANTHER NAD KINASE 261 999 - -
Rops10g01947 999 Pfam ATP-NAD kinase N-terminal domain 728 812 IPR002504 GO:0003951|GO:0006741
Rops10g01947 999 FunFam NAD kinase 2 chloroplastic 245 379 - -
Rops10g01947 999 FunFam NAD kinase 2, chloroplastic 826 966 - -
Rops10g01947 999 Gene3D - 826 966 IPR017437 GO:0003951|GO:0019674
Rops10g01947 999 MobiDBLite consensus disorder prediction 405 465 - -
Rops10g01947 999 Pfam ATP-NAD kinase C-terminal domain 846 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01947 Rops-Chr10 35597589 35604098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01947 K00858 - gmx:100796381 1594.33