Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01922 ATGAAGAGAAAAAGATCCTCAAAATTGGTGGCACCAGAAACCAAAACCACAAAAGCCTGTGAATGGGTCCCACTGAACGTGACCAGGGAAGAGCTCTCCTTACTCCTCACCTTCCCCACCGGCCAAACCTTCCGTTGGAAAAACACCGCACCTTTGCAGTACACCGGCGTCGTTGGGTCCCACCTCCTATCCCTCAAGCACCTCCAAAACGGCGACGTTTCCTACTGCCTTCACTCCCAACCCGATTCCCATTCCCATTCCAATGCCAGAACGGCCTTGCTTGATTTCCTAAACGCCGACGTTTCCCTCGCTGACATGTGGAAGGTTTTCTCAGCTTCCGATGCGAGGTTTGCTGAGCTGGCACGCCATTTGGGCGGTGCTAGGGTTCTCAGGCAAGACCCTTTTGAGTGTTTGATTCAGTTTCTGTGTTCTTCTAATAACAACATTAAGAGAATCACCAAAATGGTGGATCATGTTTCTTCTCTCGGAACTTATCTGGGTCCAGTTGGAGAGTTTCACTTCCACGCTTTCCCCACTTTGGACCAGCTTTCTTTGGTTTCAGAACAACAACTTAGAAATGCTGGTTTTGGTTACAGGGCTAAATATATAATTGGGACGGTGAATGCTTTGAAATCAAAACCTGGTGGAGGGGAAGAATGGCTTCGTTCTCTTCGTAAGTTGGATCTTCCAGATGTTATCTGTGCACTGTCTACATTACCTGGAGTGGGTCCTAAAGTGGCTGCTTGCATTGCTCTCTTCTCACTTGATCAACACCATGCCATTCCTGTTGACACCCATGTGTGGCGGATTGCCAAAAAGTATCTCTTACCTGAGCTCGCAGGTTCCAAGTTGACACCGAAGCTCTGTAATCAAGTTGCAGAGGCATTTGTAACCAAATATGGTAAATATGCGGGCTGGGCTCAAACTCTACTGTTCATAGCTGAATTGCCTTCACAAAAGGCCGTCCTACCTTCACATTTGTGGACTACCAAACAGCACAATCCTGCAAAGATAGAAGACAGTGAAGAAGTTGAGTGA 1038 0.475 MKRKRSSKLVAPETKTTKACEWVPLNVTREELSLLLTFPTGQTFRWKNTAPLQYTGVVGSHLLSLKHLQNGDVSYCLHSQPDSHSHSNARTALLDFLNADVSLADMWKVFSASDARFAELARHLGGARVLRQDPFECLIQFLCSSNNNIKRITKMVDHVSSLGTYLGPVGEFHFHAFPTLDQLSLVSEQQLRNAGFGYRAKYIIGTVNALKSKPGGGEEWLRSLRKLDLPDVICALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWRIAKKYLLPELAGSKLTPKLCNQVAEAFVTKYGKYAGWAQTLLFIAELPSQKAVLPSHLWTTKQHNPAKIEDSEEVE* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01922 345 FunFam N-glycosylase/DNA lyase OGG1 254 316 - -
Rops10g01922 345 FunFam N-glycosylase/DNA lyase 133 257 - -
Rops10g01922 345 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 25 138 IPR012904 GO:0003684|GO:0006289|GO:0008534
Rops10g01922 345 SMART endo3end 143 316 IPR003265 GO:0006284
Rops10g01922 345 SUPERFAMILY TATA-box binding protein-like 17 132 - -
Rops10g01922 345 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 17 334 - -
Rops10g01922 345 Gene3D Hypothetical protein; domain 2 133 257 - -
Rops10g01922 345 Gene3D - 106 316 IPR023170 -
Rops10g01922 345 CDD ENDO3c 135 313 IPR003265 GO:0006284
Rops10g01922 345 Pfam HhH-GPD superfamily base excision DNA repair protein 139 275 IPR003265 GO:0006284
Rops10g01922 345 SUPERFAMILY DNA-glycosylase 133 314 IPR011257 GO:0003824|GO:0006281
Rops10g01922 345 Gene3D - 11 97 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01922 K03660 - gmx:100789749 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01922 10 35344155 35346290 Rops10g01922 10 35344155 35346290 ECH