Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01913 ATGGCGAATAGGGTTTCGATTTGGTTCCTCTTCGTGTTCGCTCTCTCTCTCTTTACCTCTCAGATCTACGCAGATGAATCGGAGGCCAAGGAATTCGTGCTCACATTGGATCACTCCAACTTCTCTGACACTATCAGCAAACACAACTTCATCGTTGTCGAGTTCTACGCACCTTGGTGTGGCCACTGTAAGAAGCTTGCTCCGGAGTATGAGAAAGCTGCTTCAATCTTGAGTAGCCATGATCCTCCGGTTGTTTTGGCTAAAGTTGATGCCAATGAAGAGAAGAACAGAGATCTTGCATCAGAATATGATGTTAAGGGATTCCCAACAATCAAGATTCTGAGAAATGGTGGAAAGAACATTCAAGAGTACAAAGGTCCCCGTGAAGCCGATGGTATTGCTGACTATTTGAAGAAACAAAGTGGTCCTGCATCAACTGAGATTAAATCTGTTGATGAAGCTAGTGCTTTTATTGGGGAGAATAAAGTTGTTATTGTTGGAGTTTTTCCAAAATTTTCTGGGGAGGAGTATGAAAACTTCACTGCATTAACGGAGAAGTTGCGTGCCGACTATGACTTCGCTCACACTCTGGATGCCAAACACCTTCCACGGGGAGAATCATCAGTGTCTGGGCCCATAATTAGGTTATTCAAGCCATTTGATGAGCTTTTTGTTGACTTCCAGGATTTCCACGTGGAAGCTCTAGAGAAATTTGTTGAAGAATCTAGTGTCCCTGTTGTGACTGTCTTTAACAATGACCCTAACAATCACCCTTTTGTTGTCAAATTCTTTAACAATCCCCATGCAAAGGCAATGTTGTTCATCAACTTCACTGCTGAAGGTGCTGAATCTTTCAAATCTAAATACCGTGAAACTGCTGAGCAATTTAGGCAACAGGAGATAAGCTTTCTGGTGGGAGATGTTGAGGCTAGTCAAGGTGCCTTCCAGTATTTTGGACTAAAGGAAGACCAAGTACCTCTAATTATTATACAACATAATGATGGGAAGAAATTCTTTAAACCCCATTTGGAACCTGATCACATTTCAACTTGGTTGAAGGCATACAAGGATGGAAAGGTTGCACCATATGTTAAGTCTGAACCTATTCCTGAAGTTAACAATGAACCTGTCAAAGTGGTAGTTGGGGACAGTCTTCAGGACATAGTATTCAACTCAGGGAAGAATGTTTTGCTCGAGTTTTATGCTCCTTGGTGTGGTCACTGCAAACAGTTGGCTCCAATATTGGAGGAAGTTGCTGTCTCATATCAAAATGATGCTGATGTTATTATTGCAAAACTGGATGCAACGGCCAACGATATCCCAAGTGATACCTTTGATGTCCAAGGTTACCCAACTGTGTACTTCAGGTCAGCAAGTGGAAAGGTATCACTATACGATGGCGGTAGGACCAAGGAAGACATCATAGAATTCATTGAAAAGAGCCGGGATAAGCCTTCTCAGCAAGAACAAAAGCAGGAACAAAAGCAAGAACAAGGAAAAGATGAGCTTTGA 1512 0.422 MANRVSIWFLFVFALSLFTSQIYADESEAKEFVLTLDHSNFSDTISKHNFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVVLAKVDANEEKNRDLASEYDVKGFPTIKILRNGGKNIQEYKGPREADGIADYLKKQSGPASTEIKSVDEASAFIGENKVVIVGVFPKFSGEEYENFTALTEKLRADYDFAHTLDAKHLPRGESSVSGPIIRLFKPFDELFVDFQDFHVEALEKFVEESSVPVVTVFNNDPNNHPFVVKFFNNPHAKAMLFINFTAEGAESFKSKYRETAEQFRQQEISFLVGDVEASQGAFQYFGLKEDQVPLIIIQHNDGKKFFKPHLEPDHISTWLKAYKDGKVAPYVKSEPIPEVNNEPVKVVVGDSLQDIVFNSGKNVLLEFYAPWCGHCKQLAPILEEVAVSYQNDADVIIAKLDATANDIPSDTFDVQGYPTVYFRSASGKVSLYDGGRTKEDIIEFIEKSRDKPSQQEQKQEQKQEQGKDEL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01913 503 SUPERFAMILY Thioredoxin-like 33 143 IPR036249 -
Rops10g01913 503 ProSitePatterns Thioredoxin family active site. 397 415 IPR017937 -
Rops10g01913 503 Gene3D Glutaredoxin 142 246 - -
Rops10g01913 503 CDD PDI_a_family 34 137 - -
Rops10g01913 503 FunFam Protein disulfide-isomerase 141 241 - -
Rops10g01913 503 PANTHER PROTEIN DISULFIDE ISOMERASE 11 502 - -
Rops10g01913 503 Pfam Thioredoxin 378 480 IPR013766 -
Rops10g01913 503 Pfam Thioredoxin 33 139 IPR013766 -
Rops10g01913 503 NCBIfam protein disulfide-isomerase 33 503 IPR005792 GO:0003756
Rops10g01913 503 SUPERFAMILY Thioredoxin-like 146 245 IPR036249 -
Rops10g01913 503 PRINTS Thioredoxin family signature 59 68 - -
Rops10g01913 503 PRINTS Thioredoxin family signature 51 59 - -
Rops10g01913 503 PRINTS Thioredoxin family signature 104 115 - -
Rops10g01913 503 FunFam Protein disulfide-isomerase 372 485 - -
Rops10g01913 503 ProSiteProfiles Thioredoxin domain profile. 355 483 IPR013766 -
Rops10g01913 503 CDD PDI_a_PDI_a'_C 376 478 - -
Rops10g01913 503 CDD PDI_b_family 145 241 - -
Rops10g01913 503 SUPERFAMILY Thioredoxin-like 243 374 IPR036249 -
Rops10g01913 503 CDD PDI_b'_family 260 356 - -
Rops10g01913 503 Gene3D Glutaredoxin 365 502 - -
Rops10g01913 503 NCBIfam protein disulfide-isomerase domain 382 480 IPR005788 GO:0003756
Rops10g01913 503 NCBIfam protein disulfide-isomerase domain 37 140 IPR005788 GO:0003756
Rops10g01913 503 FunFam Protein disulfide-isomerase 22 140 - -
Rops10g01913 503 ProSitePatterns Thioredoxin family active site. 52 70 IPR017937 -
Rops10g01913 503 Pfam Thioredoxin-like domain 169 353 - -
Rops10g01913 503 Gene3D Glutaredoxin 247 364 - -
Rops10g01913 503 Gene3D Glutaredoxin 18 141 - -
Rops10g01913 503 ProSiteProfiles Thioredoxin domain profile. 23 142 IPR013766 -
Rops10g01913 503 FunFam Protein disulfide-isomerase 242 371 - -
Rops10g01913 503 MobiDBLite consensus disorder prediction 479 503 - -
Rops10g01913 503 SUPERFAMILY Thioredoxin-like 343 481 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01913 Rops-Chr10 35236286 35240725 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01913 K09580 - gmx:100170705 855.129