Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01912 ATGGGGTGCGGGGGCTCCAAGGTGGAGGAGTTCCCCGTTGTCACTCTATGTAGAGAGAGAAAGCAGTTTCTGAAAGCCGCATCGGAGCAACGTTACGCTCTCGCCGCTGCACACGTGGCGTATTTTCAGTCACTCAGGGATATAGGTGAAGCACTTCGCAGATTCGCCGACCAAGACCTTCTTCTTCCTTCATCCCCTGTTCTCACATTGCCCTCACATGAAGGCAAACCCAAGAAGAAAAACAACAACAATAACAACAAGCTTTCTTCTTCTTCGTCTTCACCTTCTATTTCTCACCATGATGATTCCCCTTCTCCCCATGGTTCCCACCTCCACCTCTCTTCTGGATCCGAATTCGGTTCCCCTTCTTCCGATCACATTCACATTCATGATAGCCCCGACCCGGAACCAGGCCCAGGCCCAGAGCCACCACCTTCCTATTCTCCTCCTCCTATTTACGGGTATCAAGATTTTTGGAACCAACCTGGGATGAACACTTATGCTTACTACATGAAGAGGTCTGCACCTCATGGAAAACCCATGATCTACCAACAACCAGAGAGCCACGTGGCAGCAACTGGGCAATGGACCGATCCACCTTACGGTTACGGTAACGGTGGTTTCTTTGGTTTTCCGGCGGGACCTTCTTCTTCTCCTTCGCCTCCTCCGCCGCCTCCTTCGCCGCCTAGAGTCTCAACTTGGGATTTCCTTAACATCTTCGATGCTTCACAGAATGGGTACCAGGGTTATGGTTACGGGTTCAGGTCGAGTGGGAGTAGTCCCGATTCGAAGGAAGTTAGGGAAAGGGAAGGGATTCCCGAATTGGAAGACGAAACAGAACAGGAAACGGTGAAGGAGATTCGTCACGAGGAGAAGAAGAAGAAAAACAAGAACAAGATGGAAGAAGAAGAAAAGGACCAACAAGAACATGTTGTTAAAGGAGGTAGAGATTTTGGGGAAGGAACTTCCAATTCAAAAACGGTGCCGTTGCAACAGGTGAGTAGCAGCGAGGGGAGTTCCAAAACGGTGCGTTTCCATAGCAGTGATGGTAGTAGTTCACTTGAAAAGGAGAGTCCTGAACCTGACATTGCTGCCTCTGAAGGAGAGCAGAAACATAAGAAAGGGGTGAGTTTTGAGATTGATCATGAACATGATGAAGCAGCAACTGTTACTACGGTGGATGGTGAATCTTCCATGTTGAGTAGCATAACAACTTTGTCTCCACATGGAACTAGGGATCTCAAAGAGGTTGTGGAAGAAATTAGAGATGAGTTTGTGACTGCCTCTGATTATGGAAAAGAGGTTGCATTGCTGCTTGAGGTTTGCAAACCACCTTATCGCTCCAGGGTTGGTGCATTTAGAGTTATCTTTTCCAGGATCTTGCAGATGGTTTCGCCTTCCAGGTTACCTTCGCATCCTCCATCTGGGCCACCGATACAATTTTCTTCTAGGACAATGAAGCTGGCAAAAGCATACTGTGGGGAACCAGGGAGAGACCTAAATCCGGAAAACCTTTCATCTACTTTGGAGAAACTTTATGCATGGGAAAAGAAATTGTATAAGGAAGTTAAGGATGAAGAGAGGTTACGAGCTATTTACGAGAAACAATGCAAGAGACTGAAAAGATTGGATAATCAAGGAGCTGAATCTAGTAAAATTGACGCTACTGAGGAATCAATAAGAAAGTTGCTGACAAAAATCAATATTTGCGTCAGAACTATTGAAACTACATCAGGAAGGATACATAAATTGAGGGATGATGAATTGCAGCCTCAGCTTGCAGCATTGATCAATGGATTGATAAGAATGTGGAGGTTCATGCTCAAATGCCACAAGAAACAGTTCCAAGCTATAATGGAGAGTAAATCTCAATCTCTTAAGTTTAACACTGGTTTGCAAAGAGATGAAGGTATGAAGGCCATCTTAGAACTTGAAAAGGAGCTTCTAAATTGGTGCAGTCAGTTCAATAATTGGGTTAAGACCCAAAAATCTTATGTTGAAAATTTGCATGGGTGGCTCATAAGGTGCCTTCTTGATGAACCTGAAGAAACAGCTGATGGTATTGTCCCTTTCTCTCCAAGTAGGATTGGAGCTCCACCAGTTTTTGTAATCTGTAATGATTGGCATCAAGCAATGTCTAGAATTTCAGAAAGAGGGGTGGCAGATGCCATGTGTGAATTTGCGCAGAAACTACATGAGCTATGGGAGAGGCAAGACGAGGAGCAACGCCAGAGAATCAAAGCAGAGTATCTCACAAAGGATTTTGAGAAACAGCTTAGAACTTTGCGCTCAGAAATGGAAGGTTCAGAACATGAGCATGATAGAGTTTCAGCAAAGACTACATTGTCAAAGCTTCCTTCTGATAGTGGTGTTTCACCACTAGATGATCTAAAGGTGGATTTAGATTCTATGAAGAAGAGATTGCATGAAGAGAGGGCCAGGCATAAAGAAGCCCTTAAACTTGTTCGTGATGCAGCTTCTAATAGTTTACAAGCTGGGTTGATTCCCATTTTTAAGACACTAGAAAGTTTCACTTCAGAGGTGGTGAAAGTTCACGAGCAAGTCAGGCTTCAAAACACAGAGGACTCGTAG 2592 0.4479 MGCGGSKVEEFPVVTLCRERKQFLKAASEQRYALAAAHVAYFQSLRDIGEALRRFADQDLLLPSSPVLTLPSHEGKPKKKNNNNNNKLSSSSSSPSISHHDDSPSPHGSHLHLSSGSEFGSPSSDHIHIHDSPDPEPGPGPEPPPSYSPPPIYGYQDFWNQPGMNTYAYYMKRSAPHGKPMIYQQPESHVAATGQWTDPPYGYGNGGFFGFPAGPSSSPSPPPPPPSPPRVSTWDFLNIFDASQNGYQGYGYGFRSSGSSPDSKEVREREGIPELEDETEQETVKEIRHEEKKKKNKNKMEEEEKDQQEHVVKGGRDFGEGTSNSKTVPLQQVSSSEGSSKTVRFHSSDGSSSLEKESPEPDIAASEGEQKHKKGVSFEIDHEHDEAATVTTVDGESSMLSSITTLSPHGTRDLKEVVEEIRDEFVTASDYGKEVALLLEVCKPPYRSRVGAFRVIFSRILQMVSPSRLPSHPPSGPPIQFSSRTMKLAKAYCGEPGRDLNPENLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKQCKRLKRLDNQGAESSKIDATEESIRKLLTKINICVRTIETTSGRIHKLRDDELQPQLAALINGLIRMWRFMLKCHKKQFQAIMESKSQSLKFNTGLQRDEGMKAILELEKELLNWCSQFNNWVKTQKSYVENLHGWLIRCLLDEPEETADGIVPFSPSRIGAPPVFVICNDWHQAMSRISERGVADAMCEFAQKLHELWERQDEEQRQRIKAEYLTKDFEKQLRTLRSEMEGSEHEHDRVSAKTTLSKLPSDSGVSPLDDLKVDLDSMKKRLHEERARHKEALKLVRDAASNSLQAGLIPIFKTLESFTSEVVKVHEQVRLQNTEDS* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01912 863 Coils Coil 752 779 - -
Rops10g01912 863 MobiDBLite consensus disorder prediction 204 234 - -
Rops10g01912 863 Coils Coil 284 310 - -
Rops10g01912 863 Coils Coil 523 543 - -
Rops10g01912 863 PANTHER UNCHARACTERIZED 1 857 - -
Rops10g01912 863 MobiDBLite consensus disorder prediction 248 374 - -
Rops10g01912 863 MobiDBLite consensus disorder prediction 136 151 - -
Rops10g01912 863 MobiDBLite consensus disorder prediction 320 349 - -
Rops10g01912 863 MobiDBLite consensus disorder prediction 764 779 - -
Rops10g01912 863 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Rops10g01912 863 Coils Coil 794 825 - -
Rops10g01912 863 MobiDBLite consensus disorder prediction 764 789 - -
Rops10g01912 863 MobiDBLite consensus disorder prediction 82 122 - -
Rops10g01912 863 MobiDBLite consensus disorder prediction 350 374 - -
Rops10g01912 863 MobiDBLite consensus disorder prediction 67 154 - -
Rops10g01912 863 MobiDBLite consensus disorder prediction 215 231 - -
Rops10g01912 863 Pfam Protein of unknown function (DUF632) 414 732 IPR006867 -
Rops10g01912 863 MobiDBLite consensus disorder prediction 281 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01912 Rops-Chr10 35221111 35226653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01912 224 745 Acyl Lipid Metabolism Gene Families AT2G27090 26.412 7.69e-47 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01912 - - aprc:113852495 1120.92