Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01900 ATGGATTGTGGGAAGAGGAACAAGGTGGAGACATTTTTCTTAGCCACTCTCATACTGTGGCTTGGCTCTGTTTGTTTCCAGATACTTTTCAACAATCGCAGGGAGCTTCTCTACATCATCGCTGGTTCCTTCTTCTACCAGACATCTAACTGCCTTATCCGATTCTTCTTCTCCAAAGTCTCATCAGACCCTCTATTCGTTAACACCTCCGTCTCTCTTCTCCACTCCGCCGTTACCTCCACTTCAGTGATTTTCATCTTGTCCAGACAGTGGTTAAGTAATGGGTCGAGTGGAATGTTTGACCACTCGCAGTTGGTTGAAGGTACTTGGCCATGGGCATTTGAAGCACTGTGCTTTTCCTGTGGTTACTTTGCATATGATCAGTGGGATATGCTTCATTACCGCCTATATAATGGTTGGATCCCTTCTATCCTTGTGCATCATCTGGTTCTCCTAATTTGTTTCACTCTTGCCTTGTATCGTAATGTCACCATCAACTACCTTATTCTCACTCTTATCTGTGAGATGCATTCCATCTTTCTGCATGTGAGAAAAGTGAGAAGAATGACCGGTTTTCGGGATGCAAAGAGCATTATTGTTAAGTTAGAATGGTTTCTTAATTGGGTCACCTTTTCTGTGGCAAGGTTTGCAGCTCACATTCTCATCACTGCCAAGCTCATCAAGGATGCTCACAAATTTGGAAAGGGTATGGAGCTACCACTGGCTCTGTTTGGCATGGCTGGGATGAATTTGCTGAACATTGGTCTTGGCTTGGATCTCTTTAAAGCTTTTAAGAGAGAGAGGAAGTCCCAGCAGGCTAATCATCATCAACATCGTGAATGA 843 0.4389 MDCGKRNKVETFFLATLILWLGSVCFQILFNNRRELLYIIAGSFFYQTSNCLIRFFFSKVSSDPLFVNTSVSLLHSAVTSTSVIFILSRQWLSNGSSGMFDHSQLVEGTWPWAFEALCFSCGYFAYDQWDMLHYRLYNGWIPSILVHHLVLLICFTLALYRNVTINYLILTLICEMHSIFLHVRKVRRMTGFRDAKSIIVKLEWFLNWVTFSVARFAAHILITAKLIKDAHKFGKGMELPLALFGMAGMNLLNIGLGLDLFKAFKRERKSQQANHHQHRE* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01900 280 Pfam TLC domain 66 253 IPR006634 GO:0016020
Rops10g01900 280 SMART lag1_27 61 266 IPR006634 GO:0016020
Rops10g01900 280 ProSiteProfiles TLC domain profile. 61 278 IPR006634 GO:0016020
Rops10g01900 280 PANTHER CT120 PROTEIN 23 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01900 Rops-Chr10 35069607 35071977 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01900 - - gmx:100806828 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01900 10 35069607 35071977 Rops10g01900 10 35069607 35071977 ECH