Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01899 ATGGCTCAAACAATGTTGCTCATGTCCAGTGTCTCTAGCTGCTATTCCGTGGATTTGAAGAAAGACCCTTTGCTCCAACTTCAAAGTCAAAGATTAAGGCCTAAGTTCTCTGAACTCTCTTTCAATCCACTTCCTTCAAACTCTTTGTTTTTTTCATCCCGTTCATTCACAACTTTGGCTCTCTTCAAATCAAAGACCAAAGCCCCTCCTCCTAAGACTAAGGTTGTGAAGCCAAAACCAAAGGTTGAAGATGGTGTCTTTGGCACTTCTGGAGGATTTGGTTTTACCAAGCAGAACGAGCTCTTTGTGGGTCGTGTTGCCATGCTTGGTTTTGCGGCATCAATATTGGGTGAAGCAATTACTGGGAAAGGAATTCTAGCACAATTGAATCTTGAAACTGGGATTCCCATTTATGAAGCCGAGCCTCTTCTCCTTTTCTTCATCCTTTTCACCCTGCTAGGAGCCATTGGAGCTCTTGGTGACCGTGGTAAATTTGTTGATGACGAACCTGCTAATACTGGAGGTGTTATTCCTCCAGGAAAAGGCGTCAGAGGAGCTCTTGGTCTCAGTGAAGGAGGTCCTTTATTTGGATTCACCAAATCCAATGAGCTCTTTGTTGGAAGATTGGCTCAATTGGGTTTTGCTTTCTCTTTGATTGGAGAAATTATTACCGGGAAGGGAGCTCTGGCACAGCTCAACATTGAGACTGGGGTACCCATTAATGAAATTGAACCACTAGTGTTGTTCAACGTTCTTTTCTTCTTCGTTGCTGCTTTGAATCCTGGAACTGGTACATTTGTTACAGATGAAGAGGAAGATTAG 822 0.4331 MAQTMLLMSSVSSCYSVDLKKDPLLQLQSQRLRPKFSELSFNPLPSNSLFFSSRSFTTLALFKSKTKAPPPKTKVVKPKPKVEDGVFGTSGGFGFTKQNELFVGRVAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDEPANTGGVIPPGKGVRGALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFVAALNPGTGTFVTDEEED* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01899 273 SUPERFAMILY Chlorophyll a-b binding protein 61 252 - -
Rops10g01899 273 Gene3D Chlorophyll a/b binding protein domain 137 244 - -
Rops10g01899 273 FunFam Photosystem II 22 kDa protein, chloroplastic 140 243 - -
Rops10g01899 273 Gene3D Chlorophyll a/b binding protein domain 40 136 - -
Rops10g01899 273 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 74 133 - -
Rops10g01899 273 FunFam Photosystem II 22 kDa protein, chloroplastic 53 139 - -
Rops10g01899 273 Pfam Chlorophyll A-B binding protein 91 218 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01899 Rops-Chr10 35063648 35065265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01899 K03542 - gmx:100807355 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01899 10 35063648 35065265 Rops10g01899 10 35063648 35065265 ECH