Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01893 ATGAACGTCTACATTGCCAGCTTCGTGATTCCCCTCGTGGTACTTCTATTCCGGAATTCCAACAACCGGAAACGCCGTGGCTTGCCGGCGAACGTCGGCGGCGAGCCAGGTTATGCGGTGAGGAACCACCGGGTCGATTCGACGTTGAGTTCGGCATGGGAGGGCGTGACGACGTTAGCGGAGCTGTTTGAGCGTGCATGCAGGGAGCACCAGGATAGGTTGTTACTCGGGACACGTGAGTTGATCTCTAGAGAGATCGAAACCTCTCACGATGGAAAAACCTTCGAGAAGCTTCATCTTGGAGATTACCAATGGCTCACCTATGGTAAAGTGTTCGAATCTGTCTCCAATTTCGCTTCTGGTTTGGCAAAGCTTGGCCATGTCAGGGAGGAGCGTGTAGCCATATTCGCTGATACCAGAGAAGAATGGTTTATTGCACTTCAGGGTTGTTTCAGGAGAAATGTGACAGTTGTGACTATATATGCGTCGTTGGGAGAGGAAGCTTTATGTCACTCATTGAATGAGACAGAGGTTACAACTGTGATTTGTGGGCGCAAAGAATTGAGATCACTTGTACATGTTAGTGGACAACTTGACTCTGTGAAACGTGTGATATGCATGGACGATAATATCCCATCTGATGCCATGTCCACTCAGCATGGCTGGACAGTCACTTCCTTTGGTGATGTTGAGAGGCTTGGTAGAGAAAACCCTATCGAGGCTGATTTACCCCTTTCAGCGGATGTTGCAGTAATAATGTACACAAGTGGAAGTACAGGGTTGCCTAAGGGTGTGATGATGACACACGGTAATGTCTTAGCAACAGTCTCTGCTGTAATGACAATTGTTCCTAACCTTGGGCCAAAGGATGTATATCTAGCATACTTACCAATGGCTCACATCCTGGAATTAGTAGCTGAGAATTTGATTGCAGCTGTTGGGGGTTGTATAGGATATGGGTCTCCTTTGACTCTTACTGATACATCGAACAAGATAAAAAAAGGGAAAAGGGGCGATGCCACTGCATTGATGCCAACTGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGTGATGGAGTGCTCAAGAAGGTGAATGCAAAAGGAGGATTGTCGAAGAAGTTGTTTTATTTAGCCTTTGCACGAAGGTTGCAAGCAATTAATGGTAGTTGGTTTGGCGCTTGGGGCTTGGAAAAAGCTCTATGGCATTTTCTTGTGTTCAAAAAGGTCCAAGCAATTCTGGGTGGTCGTATCCGTTTTATACTGTCTGGCGGTGCTCCCCTTTCTGGTGATACCCAAAGATTCATCAATATTTGTCTGGGTGCTCCAATAGGTCAAGGATATGGTCTCACAGAGACTTGTGCTGGTGGGACGTTCTCTGATTTTGACGATACATCTGTTGGCCGTGTTGGACCACCTCTTCCTTGCTCATATATTAAGCTAATTGACTGGCCTGAAGGTGGATATTCAACTAATGACTCACCTATGCCTCGTGGTGAAATTGTAATTGGCGGTCCAAATGTCACTCTTGGGTATTTCAAAAATGAAGAAAAGACAAAAGAATCTTACAAGGTTGATGAAAGAGGAGTGAGGTGGTTCTACACTGGTGACATTGGGAGATTTCATAAAGATGGTTGCCTTGAGATCATTGATAGGAAAAAGGACATAGTTAAACTGCAGCATGGAGAATATGTGTCCCTCGGAAAGGTTGAGGCAGCGCTTCTTAGCAGCCGCTTTGTGGACAACATTATGTTGCATGCTGATCCTTTTCATAGTTACTGTGTGGCACTCGTGGCAGTTTCTCATCCCGCATTAGGGGAATGGGCTTCAGAGCAAGGAATTGCTTATTCTGATTTTTCAGAACTCTGCAGCAAAGAAGAAACTGTGAAGGAGGTGCTTGCATCAATTACAAAGGAAGCAAGGAAAGCTCGTTTGGAAAAATTTGAGATTCCTGCGAAAATTAAATTGCTTTCTGACCCATGGACTCCTGAGTCTGGTCTTGTCACAGCAGCTCTTAAGTTAAAGAGAGATGTCGTTAGAAAGACTTTTCAAGAAGAGCTCTCAAAGTTATATGCCTCATAG 2085 0.4528 MNVYIASFVIPLVVLLFRNSNNRKRRGLPANVGGEPGYAVRNHRVDSTLSSAWEGVTTLAELFERACREHQDRLLLGTRELISREIETSHDGKTFEKLHLGDYQWLTYGKVFESVSNFASGLAKLGHVREERVAIFADTREEWFIALQGCFRRNVTVVTIYASLGEEALCHSLNETEVTTVICGRKELRSLVHVSGQLDSVKRVICMDDNIPSDAMSTQHGWTVTSFGDVERLGRENPIEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMTIVPNLGPKDVYLAYLPMAHILELVAENLIAAVGGCIGYGSPLTLTDTSNKIKKGKRGDATALMPTVMAAVPAILDRVRDGVLKKVNAKGGLSKKLFYLAFARRLQAINGSWFGAWGLEKALWHFLVFKKVQAILGGRIRFILSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSYIKLIDWPEGGYSTNDSPMPRGEIVIGGPNVTLGYFKNEEKTKESYKVDERGVRWFYTGDIGRFHKDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALLSSRFVDNIMLHADPFHSYCVALVAVSHPALGEWASEQGIAYSDFSELCSKEETVKEVLASITKEARKARLEKFEIPAKIKLLSDPWTPESGLVTAALKLKRDVVRKTFQEELSKLYAS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01893 694 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 38 692 - -
Rops10g01893 694 Gene3D - 45 553 IPR042099 -
Rops10g01893 694 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Rops10g01893 694 Pfam AMP-binding enzyme 99 561 IPR000873 -
Rops10g01893 694 CDD LC_FACS_euk1 101 677 - -
Rops10g01893 694 SUPERFAMILY Acetyl-CoA synthetase-like 55 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01893 Rops-Chr10 34990685 35000317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01893 24 693 Acyl Lipid Metabolism Gene Families AT2G04350 63.596 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01893 K01897 - gmx:100778889 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01893 10 34990685 35000317 Rops10g01893 10 34990685 35000317 ECH