Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01891 ATGGAAGAGAGCATTGTTTTGCAGTGGAGCCTCGTCAGATCTATCCTCTCAATCCTTCAATGGTGGGCTTTCAATGTAACCGTTATCATCGTCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTCCCCTTATCAGTATCCTGTGTCCACTTTATCTGCTCAGCCATTGGAGCATATGTGGTTATTAAGGTACTGAAGCTTAAACCACTGATAACTGTTGACCCTGAAGATCGCTGGAAAAGAATCTTTCCCATGTCATTTGTGTTCTGTATTAACATAGTGCTGGGGAATGTGAGCCTACGATACATTCCAGTTTCTTTTATGCAGACAATAAAGTCATTCACACCTGCAACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGCATTTTGACTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTGTAACAGAGCTTAGTTTTAACATGTTTGGATTTTGTGCTGCCTTATTTGGCTGTTTGGCTACATCTACAAAGACTATTCTTGCAGAATCTCTTCTGCATGGATACAAATTTGACAGCATAAACACGGTTTATTACATGGCACCTTATGCAACCATGATATTGGCGCTTCCTGCTATGTTACTCGAAGGCAATGGAGTTCTTGATTGGCTAAATACTCATCCATATCCTTGGTCGGCCCTCATCATTATTTTTAGCTCTGGGGTTTTTGCTTTCTGTCTCAACTTCTCCATTTTTTATGTGATTCACTCCACCACTGCTGTAACATTTAACGTTGCTGGAAACCTTAAGGTTGCGGTTGCTGTCCTTGTTTCTTGGCTGATATTTAGGAACCCAATTTCATATTTAAATGCTGTTGGATGTGCCGTAACTCTTGTGGGATGTACATTCTATGGTTATGTGAGGCACATGCTCTCCCAACAGCCACCAGTTCCAGGAACACCTCGGACACCCAAGACCCCTCGGAGTAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAAGGTCTAA 1029 0.4179 MEESIVLQWSLVRSILSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSAIGAYVVIKVLKLKPLITVDPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKHFDWRIWASLIPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPYATMILALPAMLLEGNGVLDWLNTHPYPWSALIIIFSSGVFAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNAVGCAVTLVGCTFYGYVRHMLSQQPPVPGTPRTPKTPRSKMELLPLVNDKLEDKV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01891 342 Gene3D - 49 157 - -
Rops10g01891 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 300 - -
Rops10g01891 342 Pfam Triose-phosphate Transporter family 16 301 IPR004853 -
Rops10g01891 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 152 - -
Rops10g01891 342 PANTHER SOLUTE CARRIER FAMILY 35 15 305 - -
Rops10g01891 342 FunFam UDP-galactose transporter 1-like 47 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01891 Rops-Chr10 34973312 34977761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01891 1 342 Organic Solute Cotransporters AT1G77610 88.047 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01891 K26222 - gmx:100809511 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01891 10 34973312 34977761 Rops10g01891 10 34973312 34977761 ECH