Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01890 ATGCTTAGTTCAACATCGTTTTTGAGACAGTTAAGTGCGAAGGAGGCTTGGAAATCAACATCAAACCGGTGGAGTGGGAAAAACAGATATAGTAGTGGTTGGGGAGTAACCGTTGGTGGGTGTGAGGCAAGTTCGAATCAAATGGAAGGGTTTAACATGTATGGTAATGAGGACAGTGGGATGATGGTGAGGAAGAGAGTGATGGTGGTGGTTGATGGCACTTCACATTCCAAGCATGCAATGATGTGGGCACTCACCCATGTAGCTAATAAGGGTGATTTGTTGACGCTGCTTCATGTTGTCCCTCCACAAAAGGGTTCTGAATCTTCTTGTTCCACCTATCTTGCCAATTATCTTGGATCCCTTTGCAAAGATTCTAAGCCAGAGGTGGAAGTGGAAGCGCTTGTTATCCAAGGACCAAAACTAGCCACAGTGATGAGCCAGGTAAAGAAGCTGGAGGTCTCTGTACTGGTGCTAGGCCAAAAGAAACCATCTTCTCTCTTAAGCTGTCTTTGCGGGAGTAGTAGCAGCAGCAGTAGCACAGAAGAGTTTGTGGAGTATTGCATCAATAACGCAGAGTGCTTGACAATAGGAGTACGGAAGAGAAGCCAGGGCACCAATGGCTACCTTATCAGCACTAGGTGGCAGAAGAACTTCTGGCTTTTGGCTTAG 672 0.4643 MLSSTSFLRQLSAKEAWKSTSNRWSGKNRYSSGWGVTVGGCEASSNQMEGFNMYGNEDSGMMVRKRVMVVVDGTSHSKHAMMWALTHVANKGDLLTLLHVVPPQKGSESSCSTYLANYLGSLCKDSKPEVEVEALVIQGPKLATVMSQVKKLEVSVLVLGQKKPSSLLSCLCGSSSSSSSTEEFVEYCINNAECLTIGVRKRSQGTNGYLISTRWQKNFWLLA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01890 223 CDD USP_Like 72 161 - -
Rops10g01890 223 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 223 - -
Rops10g01890 223 Gene3D HUPs 62 205 IPR014729 -
Rops10g01890 223 Pfam Universal stress protein family 65 177 IPR006016 -
Rops10g01890 223 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01890 Rops-Chr10 34971078 34972574 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01890 - - gmx:100816511 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01890 10 34971078 34972574 Rops10g01890 10 34971078 34972574 ECH