Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01887 ATGCCTTCTGCTCCAACAAAACTCTATGCAGATGACGTTAGCCTTCTCGTGGTCACTCTTGACACCAACCCTTTCTTTTGGAGCACTTTCCCCTTCCCCTTCTCCGAGTTTCTCTCTCAAGTGCTTGCTTTCCTCAATTCAATCCTTCTCCTCGGTCAACTTAACCAAGTGATCGTTATTGCCACCGGTTGCAATTCATGTAACTACGTTTACGATTCCACTTCCGATAAGAACCATGGTTCTACAGATGGTACAATGCCCGCGCTTTATTCCAATCTGCTCCACAATCTTGACGAATTTCTCGCTAGGGACCAGCAATTAGCCTCGCCTCATGCACCGGGAACCGTGCCGTCTTCACTGTTATCGGGGTCCTTGTCCATGGCTCTCTGTTATATACAGAGAGCTTTTCGTTCAGGACCGATGCATCCTCAACCTCGGATTTTATGTTTGCAAGGATCTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATATTCTCTGCACAGCATTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCAAATAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGCATATATTATAGACCTCCCCAATTGGACGGGCTTTTTCAATATCTTTCAACAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTAAGGCTTCCTAAATCTGTCGGTGTGGATTTTCGTGCCTCGTGCTTCTGCCATAAGCAAACAATTGACATGGGCTATGTATGTTCTGTATGCTTATCCATATTCTGCGAGCATCACGACAAGTGTTCAACCTGTGGGTCTGTATTTGGCCAGGCTCAAACAGATGCTGCCTCAGCAGCCAACCGGAAAAGAAAGGCTTGA 882 0.4524 MPSAPTKLYADDVSLLVVTLDTNPFFWSTFPFPFSEFLSQVLAFLNSILLLGQLNQVIVIATGCNSCNYVYDSTSDKNHGSTDGTMPALYSNLLHNLDEFLARDQQLASPHAPGTVPSSLLSGSLSMALCYIQRAFRSGPMHPQPRILCLQGSADGPEQYVAIMNAIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYRPPQLDGLFQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQTDAASAANRKRKA* 294
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01887 293 FunFam RNA polymerase II transcription factor B subunit 4 10 221 - -
Rops10g01887 293 Pfam Transcription factor Tfb4 13 273 IPR004600 GO:0000439|GO:0006289|GO:0006355
Rops10g01887 293 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 10 288 IPR004600 GO:0000439|GO:0006289|GO:0006355
Rops10g01887 293 Gene3D von Willebrand factor, type A domain 10 221 IPR036465 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01887 K03143 - gmx:100810574 539.265
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01887 10 34926608 34932530 Rops10g01887 10 34926608 34932530 ECH