Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01886 ATGGCAGAAGAAGAAGAAGAAAGGCAGAGTGGAGTGCAGAAAGAGGATACAGAGTCACAGATTCAAACTGCTATGCTTTCTCGCGTCCCTCACTTCAGGGAACAATCCGATTCTTTGACATTTGAGGGGGTCCGTAGATTGCTCGAGAAGGATTTGGGATTGGAAGAGTATGCTTTGGATGTTCATAAGAGATTTATCAAACAATGTTTGCTCAAGTGCTTAGAAGGGGTTGGTGATGATGATACCCCAAAGACATCAGGAGAGGCCGGGGAAAAAGGTGCAAGTGCACAAGAGACAGAAGGAGCAAAAGAAGAATGTCAATCAAAAGATGTTAAACTTGAAGATGAGGAGAAAATGGAAGACTCTCCAGTATTAGGTCTGCTTAAAGAACAAAAAGGAGTTAAAATTGAAGCCAAGGAAGCAGAAGGCAAAGGAAGAAAAATAGTCCCAAGTGAAGCCCTAATTAAGAAAGCTGTTAGGAAAAGATCTTCATATATCAAGGCTAATGCAGAGAAAGTCACCATGGCTGGTCTTCGTCGACTATTGGAGGAAGATCTTAAACTTGATAAATTTATGCTTGATCCCTATAAAAAGTTTATAAATCAACAGCTTGATGAGGTATTAGCATCTTCTGAAGTTTTGGAACCTGCAAGCGATGCTAAGAAAACTGTTAAGAAGAAACCTGATACTAAAGTGACTAAAAAGCTCTGCAGTGAAGAGAATTCTGATACGTCAGATGAGGTGAGTGATGAGGAAGAGAATGAGGATGATGAAGTTAAACCCAGAAAAAAAAGTGTTTCAAAAGGCAAGATGCCGACTTCTGTCAGACCCAAAAAGCGTAAAGGAGAGGAGACCAATCTATCCAGCAAGAAAAAGGTCAAACCTGCTAAAACAGCCTCAGAAGACAATAGTGATACAGATGATAATGGGAAAAACTCTGAAGATGAGGAGTCCCATTCGTCACCAGAGAAACCTACCAAGAAGAAAGAAGTTTCAACACCCGTCTATGGTAAACGTGTGGAGCACTTAAAATCTGTTATTAAAGCATGTGGAATGAGTGTTCCTCCCTCAATTTATAAAAAAGTCAAGCAGGTGGCTGAAAACAAACGGGAAGGGCAGCTAATTAAGGAGTTGGAGGAAATACTTTCTAGAGAAGGATTGTCTTCAAATCCATCTGAAAAGGAAATCAAGGAAGTGAAAAGGAAGAAGGCGAGAGCCAAAGAACTTGAGGGTATTGATATGAACAATATTGTATCAAGTTCACGCAGAAGGTCAACAACTAGTTTTGTGGCTCCTCCACCTCCACCTCCACCTCCACCTCCAAAGCCCAAGCTTCCGGTGAAAACCAGTGGCAATGATAATGAAGGTAGTGATAATGACAACGATGACGAAGGCAATGATGATGAAGAGGATGAAGAAGATGAAGAGGATAGTAGTGATGATGATGGAAGTCAGAGTGAAGAATTTAATGAAGCTGAAGACGACAGTGATTGA 1494 0.409 MAEEEEERQSGVQKEDTESQIQTAMLSRVPHFREQSDSLTFEGVRRLLEKDLGLEEYALDVHKRFIKQCLLKCLEGVGDDDTPKTSGEAGEKGASAQETEGAKEECQSKDVKLEDEEKMEDSPVLGLLKEQKGVKIEAKEAEGKGRKIVPSEALIKKAVRKRSSYIKANAEKVTMAGLRRLLEEDLKLDKFMLDPYKKFINQQLDEVLASSEVLEPASDAKKTVKKKPDTKVTKKLCSEENSDTSDEVSDEEENEDDEVKPRKKSVSKGKMPTSVRPKKRKGEETNLSSKKKVKPAKTASEDNSDTDDNGKNSEDEESHSSPEKPTKKKEVSTPVYGKRVEHLKSVIKACGMSVPPSIYKKVKQVAENKREGQLIKELEEILSREGLSSNPSEKEIKEVKRKKARAKELEGIDMNNIVSSSRRRSTTSFVAPPPPPPPPPPKPKLPVKTSGNDNEGSDNDNDDEGNDDEEDEEDEEDSSDDDGSQSEEFNEAEDDSD* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01886 497 MobiDBLite consensus disorder prediction 276 338 - -
Rops10g01886 497 SMART CHZ_2 403 438 IPR019098 -
Rops10g01886 497 MobiDBLite consensus disorder prediction 77 122 - -
Rops10g01886 497 MobiDBLite consensus disorder prediction 218 242 - -
Rops10g01886 497 MobiDBLite consensus disorder prediction 456 497 - -
Rops10g01886 497 MobiDBLite consensus disorder prediction 429 446 - -
Rops10g01886 497 MobiDBLite consensus disorder prediction 390 410 - -
Rops10g01886 497 MobiDBLite consensus disorder prediction 1 21 - -
Rops10g01886 497 MobiDBLite consensus disorder prediction 213 338 - -
Rops10g01886 497 Pfam Histone chaperone domain CHZ 405 434 IPR019098 -
Rops10g01886 497 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 149 209 IPR014876 -
Rops10g01886 497 MobiDBLite consensus disorder prediction 97 122 - -
Rops10g01886 497 MobiDBLite consensus disorder prediction 382 497 - -
Rops10g01886 497 PANTHER HIRA-INTERACTING PROTEIN 3 1 495 IPR037647 -
Rops10g01886 497 MobiDBLite consensus disorder prediction 414 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01886 Rops-Chr10 34915646 34921351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01886 12 436 EF-hand Containing Proteins AT1G44780 47.806 1.99e-102 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01886 - - gmx:100784738 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01886 10 34915646 34921351 Rops10g01886 10 34915646 34921351 ECH