Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01879 ATGGCGAAGGGCATCATCCTAAGCTCTGGAACCCAAACCACTCTGATCTTGTTGTTATGCTTCCTCACAACTCTTATGCTCCCTAAAACTGAGGCCGTATGGTTAACCATCCCCAGTTCGGGAACTAAGTGCGTGTCCGAGGAAATCCAGACACATGTCGTCGTTTTAGCTGATTACTATGTTGTAGCCGATGATGTCCAAGGTCACCAGCTTCACCCTATTTCTGCCAAGGTGACATCTCCTTATGGAAATAATATTCATGACAATGAAAATGTAACCCACGGTCAGTTTGCATTTACAACTACCGAGAGTGGGAACTACGTGGCGTGCTTTTGGATTGATAATAAACAACATCAAGAAGGTGCAGTAGGCGCCACACTCAGCCTTGACTGGAAAACTGGAATCGCTGCCAAAGATTGGGACACCGTTGCAAGAAAAGAAAAGATAGAGGGTGTTGAACTTGAGCTAAGGAAACTAGAAGGAGCTGTGGAAGCCATTCGTGATAATCTAATTTATTTGAAAGAGAGGGAAGCGGAGATGAGGGAAGTTAGTGAAGCAACAAATGCTAGAGTTGCTTGGTTCAGTATCACGTCTCTTGGTGTCTGCCTTTCGGTTTCGGGGCTGCAACTGTTGTATCTGAAACGCTACTTTAGAAAGAAGAAGCTCATATAG 672 0.4479 MAKGIILSSGTQTTLILLLCFLTTLMLPKTEAVWLTIPSSGTKCVSEEIQTHVVVLADYYVVADDVQGHQLHPISAKVTSPYGNNIHDNENVTHGQFAFTTTESGNYVACFWIDNKQHQEGAVGATLSLDWKTGIAAKDWDTVARKEKIEGVELELRKLEGAVEAIRDNLIYLKEREAEMREVSEATNARVAWFSITSLGVCLSVSGLQLLYLKRYFRKKKLI* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01879 223 ProSiteProfiles GOLD domain profile. 42 158 IPR009038 -
Rops10g01879 223 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 14 220 IPR015720 -
Rops10g01879 223 Coils Coil 149 176 - -
Rops10g01879 223 Pfam emp24/gp25L/p24 family/GOLD 34 218 IPR009038 -
Rops10g01879 223 SMART EMP24_GP25L_2 32 218 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01879 Rops-Chr10 34800193 34802253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01879 K20352 - gmx:100500676 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01879 10 34800193 34802253 Rops10g01879 10 34800193 34802253 ECH