Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01877 ATGGGTCTCTCCAAGGAACACCTCCTTGCACGGTTACAGGAGCTTCAGATTGAATTTTCTAAGTACGAGCATCCAGTTGTTTTGACTGTTGAGGCTCAGGCAAATTATGTTGGACATTTGGGGGGTGGGATCAGTAAAAATTTATTTTTGAAGGACAAGAAAAACAGATTTTATATTGTTTCTGCTCTAGCTGATACCAAAGTAGACCTCAAAGTGTTATCCCAGCGGCTTGGTTTGGGAAAAGGTGGTGTGAGAATGGCCCCCGAAGAGGCTTTAGGTGAAATACTTCAGGTATCCTTGGGTTGTGTCACTCCGTTTGCAGTGGTGAATGAATCAGCACGAGATGTTTCACTGTTATTGGATCAAGGGTTCAAGACACAGAAGCACTGCATCTTCCATCCACTGTCAAATGACATGTCCATATCTCTAACTGCACAAGATCTTGACAAATTTCTTAAATCAATAGGAAGAAATCCTGCGTATGTTGATTTGGAGGCCAATCCTTCAGTGGGGAAAGATCAACCCCCCGACCTAGCTGCACTGGTTCCATCTGGTTCAGTTATTTTACCTGATCAACCACAAAAGCAATCTTCTTCAGAAGTTCCCAAGGACGGAAACCTTGTTTCTGTGGATAATAGGTCCAAGACAGTTTCAGCCAAAGTGGTGAAGCCATCCGTTGGTGGGAAAACTACACAGGGAACACCGGTCAAAAATGTGAATTCATCAAGGTCCTTTGCAGATGTTGGGCAATTCGTTGAAGAGATATTGCATAAAACATCAGAGTTATTGCTTTCAGAGATCAAGGAAGAAACTATAAAGCTACACAGAGATCAGCTGGGTTCTGTGGTATCTGACAAATTACAGAAAAACCTCAGCTCTGATTTAAAAAATCTTGCAATGATATTTAAGAACACTGCATATACAGAAGGGTTCCATGCTGGTACTCACCATCAGCCTAGGCGTTTGTGA 969 0.4241 MGLSKEHLLARLQELQIEFSKYEHPVVLTVEAQANYVGHLGGGISKNLFLKDKKNRFYIVSALADTKVDLKVLSQRLGLGKGGVRMAPEEALGEILQVSLGCVTPFAVVNESARDVSLLLDQGFKTQKHCIFHPLSNDMSISLTAQDLDKFLKSIGRNPAYVDLEANPSVGKDQPPDLAALVPSGSVILPDQPQKQSSSEVPKDGNLVSVDNRSKTVSAKVVKPSVGGKTTQGTPVKNVNSSRSFADVGQFVEEILHKTSELLLSEIKEETIKLHRDQLGSVVSDKLQKNLSSDLKNLAMIFKNTAYTEGFHAGTHHQPRRL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01877 322 MobiDBLite consensus disorder prediction 190 210 - -
Rops10g01877 322 Gene3D - 2 171 IPR036754 GO:0002161
Rops10g01877 322 Pfam Aminoacyl-tRNA editing domain 24 151 IPR007214 GO:0002161
Rops10g01877 322 SUPERFAMILY YbaK/ProRS associated domain 4 164 IPR036754 GO:0002161
Rops10g01877 322 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 321 IPR040285 -
Rops10g01877 322 CDD PrdX_deacylase 5 162 - -
Rops10g01877 322 FunFam Putative prolyl-tRNA synthetase 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01877 Rops-Chr10 34778104 34783728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01877 - - gmx:100817904 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01877 10 34778104 34783728 Rops10g01877 10 34778104 34783728 ECH