Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01875 ATGGAATCTCAAAAGAGCCAAGCCAAGCTAACAAGAACCCAATCCTCGTTGCTTAGTTCTTCCCCTACAATCCGATCAACCATTCATAGCCTTTCTTCCATCCACAAGGAAGAACTCGTGGATATCCACGATGACGACGAGAACAAGAAGAAGAAGAAGAAGAACAAGAAGCCTCATTCTTCCACCCCGAGAACCGGGTCGACCCGAATAACCGCCCCGGTTCTTGCGGTTACTTCGCTCGGTTTCCTCTCCCTCTTTTTCTACTTCTCCTACCTCGGGAGTGACGAGATACCCACTTCGGAGAATGTTTTACTGGCGCTGATTTTCATCGCTGTGGCACTCTACTTTGCTTCCAAGAACAAGGGCCTCATTCACCACTCCGTTTCGCTGGTGAAGCATTCATGGGACGGGAATGTGAAGCGGTTGCGGTTTTCGAAGACTCCGGCGAAACAGGTTCAGTGGTTCATCGGGGATTCTGGTGGAACAAAAGAGAAGGTTATAAGGGAAGGGGTGGAGTTTTACAGTAATGGGGATTTTTACGAGGGGGAGTTTCATAAAGGGAGGAGTAATGGGAGTGGGGTTTACAATTACTTTGTGAATGGGAGATATGAGGGTGATTGGGTTGATGGAAGGTATGATGGGTATGGGATTGAGAGTTGGGCAAGGGGGAGTCGCTACAGGGGTCAGTATAGGCAAGGGTTGAGGCATGGTTATGGGGTTTATAGGTTCTATACTGGGGATTCTTATGCTGGGGAATGGTGTAACGGTCAGAGCCATGGCATGGGACTTCAAACTTGTTCCGATGGTAGCTCTTATATTGGTCAGTTTAAGCATGGTGTCAAGCATGGCCTTGGATGTTACTATTTTAGAAATGGAGATAGATATGCTGGTGAGTATTTTGCAGACAAGATTCATGGATTTGGGGTCTACCACTTTGCCAATGGCCACTGTTATGAGGGAGCATGGCATGAGGGCCGTAGGCAAGGTGTTGGCACATATACTTTTCGAAACGGTGACAGAAAATGTGGTGAATGGGATGCTGGCAACCTCAAGCACACTCTACCACCACCACTATCTGATGTGGTCCTTCGGGCAGTTCAGGCTGCTAGGAAAACAGCAGAGAATGCTATAGACCTTAGGCGCGTGGATGATCAAGTTAACAAAGCAGTAATCGCTGCTAACAAGGCTGCCACTGCCGCTAGAGTTGCTGCTGTGAAAGCTGTTCAGAACAGGATGGATGGAAAATTTTGCGATACTGAAGTCTGA 1266 0.4795 MESQKSQAKLTRTQSSLLSSSPTIRSTIHSLSSIHKEELVDIHDDDENKKKKKKNKKPHSSTPRTGSTRITAPVLAVTSLGFLSLFFYFSYLGSDEIPTSENVLLALIFIAVALYFASKNKGLIHHSVSLVKHSWDGNVKRLRFSKTPAKQVQWFIGDSGGTKEKVIREGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWVDGRYDGYGIESWARGSRYRGQYRQGLRHGYGVYRFYTGDSYAGEWCNGQSHGMGLQTCSDGSSYIGQFKHGVKHGLGCYYFRNGDRYAGEYFADKIHGFGVYHFANGHCYEGAWHEGRRQGVGTYTFRNGDRKCGEWDAGNLKHTLPPPLSDVVLRAVQAARKTAENAIDLRRVDDQVNKAVIAANKAATAARVAAVKAVQNRMDGKFCDTEV* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01875 421 SMART morn 178 200 IPR003409 -
Rops10g01875 421 SMART morn 270 291 IPR003409 -
Rops10g01875 421 SMART morn 293 314 IPR003409 -
Rops10g01875 421 SMART morn 316 337 IPR003409 -
Rops10g01875 421 SMART morn 224 245 IPR003409 -
Rops10g01875 421 SMART morn 201 222 IPR003409 -
Rops10g01875 421 SMART morn 247 268 IPR003409 -
Rops10g01875 421 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 163 208 - -
Rops10g01875 421 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 301 346 - -
Rops10g01875 421 Gene3D - 301 357 - -
Rops10g01875 421 Gene3D - 168 209 - -
Rops10g01875 421 Gene3D - 255 300 - -
Rops10g01875 421 Gene3D - 210 254 - -
Rops10g01875 421 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 255 300 - -
Rops10g01875 421 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 174 270 - -
Rops10g01875 421 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 18 377 - -
Rops10g01875 421 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 245 348 - -
Rops10g01875 421 MobiDBLite consensus disorder prediction 42 67 - -
Rops10g01875 421 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 209 254 - -
Rops10g01875 421 Pfam MORN repeat 295 316 IPR003409 -
Rops10g01875 421 Pfam MORN repeat 226 247 IPR003409 -
Rops10g01875 421 Pfam MORN repeat 318 340 IPR003409 -
Rops10g01875 421 Pfam MORN repeat 249 270 IPR003409 -
Rops10g01875 421 Pfam MORN repeat 203 225 IPR003409 -
Rops10g01875 421 Pfam MORN repeat 180 197 IPR003409 -
Rops10g01875 421 Pfam MORN repeat 272 294 IPR003409 -
Rops10g01875 421 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01875 Rops-Chr10 34757497 34759823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01875 123 354 Acyl Lipid Metabolism Gene Families AT1G21980 31.897 1.42e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01875 - - cave:132183918 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01875 10 34757497 34759823 Rops10g01875 10 34757497 34759823 ECH