Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01874 ATGTCCACTGTTTCCACTGAGAATGAGACATCTACCCAGAAAACGCATCATCCTTTGCAGATTGCAAAGCGCTTAGAGAAGTTTCAGACAACAATCTTCACGACAATGAGTATGCTTGCCATCAAACACGGAGCCGTAAACCTTGGTCAGGGCTTTCCCAACTTTGATGGTCCAGAATTTGTAAAGGAAGCAGCAATTCAGGCAATCAGGGATGGGAAAAATCAGTATGCCAGGGGTTATGGAGTTCCAGACCTGAACCTTGCCATTGCTGAGAGATTTAACAAAGACACTGGACTAGTGGTAGACCCTGAAAAGGAAGTTACTGTCACAACTGGATGCACAGAAGCAATTGCTGCAACTATGTTAGGCTTAATAAATCCCGGTGATGAGGTTATCCTCTTTGCTCCATTTTATGATTCCTATGAAGCCACTTTATCCATGGCTGGTGCAAAAATAAAAAGCATCACTTTGCGCCCTCCAGATTTTGCTGTCCCCATTGAAGAATTGAAGTCCACCATCTCAAAGAATACCCGTGCCATTCTTTTAAACACCCCTCACAACCCAACTGGAAAGATGTTCACTCGAGAGGAACTCAATACCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCACTGATGAAGTTTATGATAAGTTGGCATTTGATATGGAGCACATTTCATTGGCTTCTTTGCCTGGAATGTTTGAAAGAACAGTGACAATGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATTGGGTGGGCCATAGCACCCCCACACTTAACATGGGGATTGCGACAAGCACATGCTTTCCTCACTTTCTCAACCTCCCATCCCATGCAGTGGGCTGCTTCAGTAGCTCTTAGAGCACCAGATTCTTACTATATAGAGCTAAAGAGGGATTATATGGCAAAGAGAGCTATTTTGGTCGAAGGGTTGAAGGCTGTTGGCTTCAAGGTATTCCCATCCAGTGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACATGAAAATGATGTCGCATTTTGTGAATATCTAGTTAAGGAGGTGGGAGTGGTGGCAATTCCTACCAGTGTATTTTACTTGAACCCAGAAGAGGGAAAGAATCTAGTCAGATTTACTTTCTGCAAGGATGAGGAAACTCTTAGGGCTGCTGTTGAGAGGATGAAGACGAAGCTTAGAAAATGA 1209 0.4359 MSTVSTENETSTQKTHHPLQIAKRLEKFQTTIFTTMSMLAIKHGAVNLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDLNLAIAERFNKDTGLVVDPEKEVTVTTGCTEAIAATMLGLINPGDEVILFAPFYDSYEATLSMAGAKIKSITLRPPDFAVPIEELKSTISKNTRAILLNTPHNPTGKMFTREELNTIASLCIENDVLVFTDEVYDKLAFDMEHISLASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGLRQAHAFLTFSTSHPMQWAASVALRAPDSYYIELKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGHENDVAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEETLRAAVERMKTKLRK* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01874 402 Gene3D Aspartate Aminotransferase, domain 1 35 396 IPR015422 GO:0003824
Rops10g01874 402 PANTHER FI04487P 21 401 - -
Rops10g01874 402 CDD AAT_like 46 397 - -
Rops10g01874 402 SUPERFAMILY PLP-dependent transferases 20 400 IPR015424 -
Rops10g01874 402 FunFam Aminotransferase, class I/classII 58 296 - -
Rops10g01874 402 Coils Coil 389 402 - -
Rops10g01874 402 Gene3D - 58 296 IPR015421 GO:0003824
Rops10g01874 402 Pfam Aminotransferase class I and II 46 395 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01874 Rops-Chr10 34736665 34739397 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01874 K23977 - gmx:100818968 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01874 10 34736665 34739397 Rops10g01874 10 34736665 34739397 ECH