Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01873 ATGGAGAGCGAGTCCACCACCCAGAAAACTCACCGCCCTTTGCAGGTTTCAAAGCGCTTGGAGAAGTTCAAAACAACAATCTTCACCCAAATGAGTGTGCTTGCCATCGAATATGGAGCCATAAACCTTGGTCAGGGCTTTCCCAACTTTGATGGTCCAGAATTTGTTAAGGAAGCAGCAATTCAGGCAATCAGGGATGGGAAAAATCAGTATGCCAGGGGTTATGGAGTTCCAGACCTGAACCTTGCCATTTCTGAGAGATTTAAGAAAGATACTGGACTAGTGGTAGACCCTGAAAAGGAAGTTACTGTTACAACTGGATGCTCCGAAGCAATTGCTGCAACTATGTTAGGATTGATAAATCCTGGTGATGAGGTTATCCTGTTTGCTCCCTTTTATGATTCTTATAATGCCACTTTATCCATGGCTGGTGCAAAAATCAAAAGCATCACTTTGAGGCCTCCCGAATTTGCTGTCCCAATTGAAGAGTTGAAGTCCACCATCTCAAAGAAAACCCGTGCCATTCTTATAAATACCCCTCACAACCCAACTGGAAAGATGTTCACTCGAGAGGAACTCAATACCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCACTGATGAAGTTTATGATAAGTTGGTATTTGATATGGAGCACATTTCAATAGCTTCTTTGCCTGGAATGTTTGAAAGGACAGTGACAATGAACTCCTTGGGGAAGACATTCTCTTTAACAGGATGGAAGATTGGATGGGCCATAGCACCCCCACACTTAACATGGGGATTGCGACAGGCACATGCTTTCCTCACTTTCTCAACCTCCCATCCCATGCAGTGGGCTGCTTCAATAGCTCTTAGAGCACCAGATTCTTACTATGTGGAACTAAAGAGGGATTATACGGCAAAGAGAGCTATTTTGATGGAAGGATTGAAGGAAATTGGCTTCAAAGTATTCCCATCCAGTGGAACCTTCTTTGTGCTTGTAGATCATACCCCTTTTGGACATGAAAATGATGTTGCATTTTGTGAATATCTAATTAAGGAGGTAGGAGTGGTGGCAATCCCTACCAGTGTATTTTACTTGAATCCAGAAGAAGGAAAGAATCTAGTCAGGTTTACTTTCTGCAAGGATGAGGAAACTCTTAGGTCCGCAATTGAGAGGATGAAGAAGAAGCTTAGAAAATGA 1194 0.4263 MESESTTQKTHRPLQVSKRLEKFKTTIFTQMSVLAIEYGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDLNLAISERFKKDTGLVVDPEKEVTVTTGCSEAIAATMLGLINPGDEVILFAPFYDSYNATLSMAGAKIKSITLRPPEFAVPIEELKSTISKKTRAILINTPHNPTGKMFTREELNTIASLCIENDVLVFTDEVYDKLVFDMEHISIASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGLRQAHAFLTFSTSHPMQWAASIALRAPDSYYVELKRDYTAKRAILMEGLKEIGFKVFPSSGTFFVLVDHTPFGHENDVAFCEYLIKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEETLRSAIERMKKKLRK* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01873 397 Gene3D - 53 291 IPR015421 GO:0003824
Rops10g01873 397 SUPERFAMILY PLP-dependent transferases 15 396 IPR015424 -
Rops10g01873 397 Coils Coil 381 397 - -
Rops10g01873 397 CDD AAT_like 41 393 - -
Rops10g01873 397 PANTHER FI04487P 15 396 - -
Rops10g01873 397 Gene3D Aspartate Aminotransferase, domain 1 30 391 IPR015422 GO:0003824
Rops10g01873 397 FunFam Aminotransferase, class I/classII 53 291 - -
Rops10g01873 397 Pfam Aminotransferase class I and II 41 390 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01873 Rops-Chr10 34722120 34724106 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01873 K23977 - gmx:100818968 719.153