Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01864 ATGGCTTCTGAGAAGGTTGAGACTGTTGTTGCAGGAAATTACTTAGAAATGGAGAGGGAAGAGGAAGATTCTAAGTCCACTGTTAGCAAATTATCTAGACTCTTCTGGCACGGTGGTTCTGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTACTGACATTACCATATTCATTTTCACAACTTGGGATGTTATCTGGGATTATATTTCAGCTTTTTTATGGACTGATGGGAAGCTGGACTGCTTACCTTATCAGTGTCCTTTATGTTGAGTATAGAACCAGAAAGGAGAGAGAGAAGGTTGATTTCAGGAACCATGTTATTCAGTGGTTTGAAGTTCTTGATGGACTTTTAGGCAAACACTGGAGGAATCTTGGTCTCTTTTTCAACTGTACTTTCCTTCTGTTTGGATCAGTAATTCAACTAATCGCCTGTGCAAGTAACATATACTACATAAATGACAATTTGGACAAGAGAACTTGGACTTACATCTTCGGTGCCTGCTGTGCGACAACAGTGTTCATCCCTTCTTTCCACAATTACAGAATCTGGTCATTCTTGGGCCTCATGATGACTACTTTCACTGCATGGTATATGACCATAGCTTCCCTTACCCACGGACAGGTTGAGGGTGTGAAGCACTCAGGGCCAACCAAATTGGTTCTCTACTTCACCGGGGCTACCAACATTCTCTACACTTTCGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTTAAGCTGATATATCTGATCGCAACACTATATGTGCTGACCCTAACTTTGCCATCAGCTGCTGCAGTTTATTGGGCATTCGGGGACTTGCTTCTCACCCATTCCAATGCACTCTCATTGCTCCCTAGGAACGGGTTCAGAGATACCGCTGTTATTCTCATGCTCATCCATCAGTTCATAACTTTTGGATTTGCTTGCACTCCTTTATACTTTGTATGGGAGAAATTCATTGGGGTGCATGAGACCAAGAGTTTGATCAAAAGGGCATTGGCTAGACTTCCTGTTGTGATTCCAATATGGTTCTTGGCAATCGTATTCCCTTTCTTTGGCCCTATCAACTCAACTGTTGGATCCCTCTTGGTCAGCTTCACCGTTTACATTATTCCTGCCATGGCACACATGGTAACCTTTGCTTCAGCACCAGCTAGAGAGAACGCTGTGGAGAGACCACCATCAATGTTAGGAGGTTGGGTAGGATCGTACTCCATGAACGTCTTTGTGGTGGTATGGGTTTTGGTGATAGGATTTGGGTTGGGAGGATGGGCAAGCATGGTTAATTTCATACGCCAAGTTGACACATTTGGGCTATTTGCTAAGTGCTATCAGTGTCCCCCTCATAAGGCTTAA 1398 0.4363 MASEKVETVVAGNYLEMEREEEDSKSTVSKLSRLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLMMTTFTAWYMTIASLTHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKLIYLIATLYVLTLTLPSAAAVYWAFGDLLLTHSNALSLLPRNGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLIKRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPAMAHMVTFASAPARENAVERPPSMLGGWVGSYSMNVFVVVWVLVIGFGLGGWASMVNFIRQVDTFGLFAKCYQCPPHKA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01864 465 PANTHER OS05G0424000 PROTEIN-RELATED 43 426 - -
Rops10g01864 465 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01864 Rops-Chr10 34554047 34556756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01864 1 464 Organic Solute Cotransporters AT1G77690 86.994 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01864 K13946 - gmx:100815243 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01864 10 34554047 34556756 Rops10g01864 10 34554047 34556756 ECH