LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops10g01858	ATGCATCCTTTTTGCTGTGTCTCCGCCATTTCCGACCAGGCTTCGCCGACTCCTTTCCCTGACTTCATCATGGCTCCTCCTCCGCCGCCGCCGGCCGCCATTAGATCCGATTCGATTCACCGCCATTCGAACAGTCACAGCAGAAACCATTCCATCAGTAACAGCGAGTACGGACGGTTAAGCCAGCGGGAACAGCCGGTGGTGGTCGACGTTAAGATCAACGACCTCGTCGGTAACGGAATCTCCGGTATACTCTATAAATGGGTCAATTACGGTAAAGGATGGAGACCTCGATGGTTCGTTCTTCAAGACGGCGTTCTCTCTTACTACAAGATTCACGGTCCTGATAAGATCATCGTCAATCCTGAAACCGAGAAAGGTTCCAAGGTTATAGGCGAAGAATCCATGCGGAGAATCACTCGTAACCGCAATTCTTACCCCTCTCAACACCGTCGAAAGCCCTTTGGGGAAATCCATCTCAAGGTTTCAACGATTCGTGAGAGCAAATCCGATGACAAGCGATTTTCCATTTTTACTGGAACGAAGAGACTTCATTTGAGAGCGGAGACACGTGAAGATCGAGTGGCATGGGTGGAGGCTTTGCAAGCAGTGAAAGACATGTTCCCTCGAATTTCCAACAGTGAGTTGATGGCTCCGGTGGACAATGTAACCATTTCCACTGAGAAACTGAGACATAGGCTTCTAGAAGAAGGAGTGAGCGAGGAAGCCATTCAGGACAGTGAACAAATTATGAGAAGTGAATTTGCGGCGCTGCAAAATCAACTCATGCTGCTTAAGCAAAAGCAGTCTATTCTAATTGACACGTTACGGCAATTAGAGACTGAAAAGGTTGATTTGGAGAATACAGTCGTTGATGAGAGCCAAAGACAGTGGAATGATCAAGAGGCTTCCTGTGGATTAACACCAGAAAAATTTAGTGAAGGAACTGCAAGTGAATCTGAGGATGATAATGAGAGAAATGATGCAGCAGAGGAAGAAACAGATGACGATGACAATGTCTTTTTTGATACTCGTGATATTCTATCATCCAGTTCTTTTAAAAGTAACGGGTCTGATTATAGAGTATCATCTTTCTCTTCAGATAACGAAGAGCTCTATGCATTTGAATCAGAGGAGGATGTAGATCCTTCGATTAGATATATTGGAACCAATCACCCTTATGTTAAGCGGCGTAAGAAATTGCCAGACCCTGTAGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCTCTCTCCTCCCTGCAAAAATGTTTTGAAGAAATGGAATATTCATATCTGCTGGACCAAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGGATTCTCTATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCATCTGAAGGAAGAGTTTGCAAACCATTTAATCCATTACTTGGGGAAACATATGAGGCTAACTATCCAGATAAAGGCCTTCGTTTTTTCTCAGAGAAGGTCAGTCATCATCCTATGATAGTTGCATGTCACTGTGAGGGTACGGGTTGGAAATTTTGGGGGGATAGCAACCTAAAGAGCAAATTTTGGGGACGATCTATTCAGCTTGACCCTGTTGGTGTTTTGACTTTGGAATTTGATGATGGGGAGGTTTTCCAGTGGAGCAAGGTTACCACATCAATATACAATCTTATATTGGGAAAGCTATACTGTGATCACTATGGTACAATGCGTATACAGGGAAACCGAGAGTACTCGTGTAAACTGAAATTCAAAGAACAATCTATAATTGATCGAAATCCTCACCAGGTCCATGGTATTGTTCAAGATATGAATGGTAAAACAGTATCAACTTTGTTTGGAAAATGGGATGAAAGCGTGCATTATGTTAATGGAGACTACACTGGGAAGGGGAAAAGTCATGAATCTTTGTCAGAAGCCCATTTACTCTGGAAGCGAAGCAAGCCTCCCAAGTTTCCCACTAGATATAACTTCACTCGCTTTGCCATCACCTTAAATGAACTTACCCCTGGATTGAAGGAGAAGTTGCCACCTACAGATTCCAGGTTAAGACCAGACCAAAGGCATTTGGAAAATGGGGAATATGAGATGGCAAATTCAGAAAAGTTACGGCTTGAGCAGCGACAACGCCAGGCTCGGAAGATGCAAGATAGCGGTTGGAAACCACGGTGGTTTGCTAAGGATAAAGCGAGCGGCACATACCGCTATATAGGAGGGTATTGGGAGGCCCGACAACAAGGAAACTGGGACTCCTGTCCTGACATCTTTGGCCAAATTACTTCGGATCATCTTACCAACGAAGGTCAAATTACATTGTAG	2385	0.4386	MHPFCCVSAISDQASPTPFPDFIMAPPPPPPAAIRSDSIHRHSNSHSRNHSISNSEYGRLSQREQPVVVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNPETEKGSKVIGEESMRRITRNRNSYPSQHRRKPFGEIHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWVEALQAVKDMFPRISNSELMAPVDNVTISTEKLRHRLLEEGVSEEAIQDSEQIMRSEFAALQNQLMLLKQKQSILIDTLRQLETEKVDLENTVVDESQRQWNDQEASCGLTPEKFSEGTASESEDDNERNDAAEEETDDDDNVFFDTRDILSSSSFKSNGSDYRVSSFSSDNEELYAFESEEDVDPSIRYIGTNHPYVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDQAYEWGRRGNSLMRILYVAAFAVSAYASSEGRVCKPFNPLLGETYEANYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNREYSCKLKFKEQSIIDRNPHQVHGIVQDMNGKTVSTLFGKWDESVHYVNGDYTGKGKSHESLSEAHLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEMANSEKLRLEQRQRQARKMQDSGWKPRWFAKDKASGTYRYIGGYWEARQQGNWDSCPDIFGQITSDHLTNEGQITL*	795

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops10g01858	794	MobiDBLite	consensus disorder prediction	33	59	-	-
	Rops10g01858	794	Gene3D	-	498	673	-	-
	Rops10g01858	794	Pfam	Oxysterol-binding protein	412	766	IPR000648	GO:0008289
	Rops10g01858	794	Coils	Coil	717	737	-	-
	Rops10g01858	794	Gene3D	-	709	777	-	-
	Rops10g01858	794	FunFam	Oxysterol-binding protein-related protein 2A	709	780	-	-
	Rops10g01858	794	SUPERFAMILY	Oxysterol-binding protein-like	407	786	IPR037239	-
	Rops10g01858	794	CDD	PH_ORP_plant	81	213	-	-
	Rops10g01858	794	SUPERFAMILY	PH domain-like	81	206	-	-
	Rops10g01858	794	Gene3D	-	79	208	IPR011993	-
	Rops10g01858	794	PANTHER	OXYSTEROL-BINDING PROTEIN-RELATED	80	766	IPR000648	GO:0008289
	Rops10g01858	794	MobiDBLite	consensus disorder prediction	324	340	-	-
	Rops10g01858	794	FunFam	oxysterol-binding protein-related protein 1D isoform X1	498	670	-	-
	Rops10g01858	794	Coils	Coil	276	296	-	-
	Rops10g01858	794	Pfam	Pleckstrin homology domain	86	202	-	-
	Rops10g01858	794	MobiDBLite	consensus disorder prediction	295	341	-	-
	Rops10g01858	794	ProSiteProfiles	PH domain profile.	78	206	IPR001849	-
	Rops10g01858	794	SMART	PH_update	79	208	IPR001849	-
	Rops10g01858	794	MobiDBLite	consensus disorder prediction	295	314	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops10g01858	Rops-Chr10	34442100	34448374	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops10g01858	K20456		-	gmx:100137077	1376.3

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops10g01858	10	34442100	34448374	Rops10g01858	10	34442100	34448374	ECH