Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01848 ATGGCTAAAGTTGGTAAGGTGCGGTGCAAGTCCCGATCGCAAGGTCACAGGGCAACCCCATGTCTTTTATCTTGTGCAAGAAAAAATCTTAAAAATGTTAATGTAAAGAAGAGCTTTGCCAAAGCATCAGAAAAGAAAGATTGGGAAGATGCAACCTGCTCAGTCTGTATGGAGGTCCCCCACAATGCTATCCTTCTCCTTTGTTCATCTTATAACAAGGGTTGTCGCCCATATATGTGTGCTACTAGTCATCGCTATTCAAATTGTTTTGAACAGTACAAAAAGGAGTACACAAAAGCAACTTCTGTTCAAAGTTTGCAGCTAGAAACAGACAATTCAAATTTTGATTTAAACGCAGGTGAACCTAATGACAATACAGAAGTTCCCGAGCTTCTTTGCCCCCTTTGTCGCCGGCAGGTGAAAGGTTGGACGGTGGTTGAAGCAGCACGGAAGTCTCTGAATGCCAAGAAAAGAAGCTGTATGCAAGATGATTGCTCTTATGTAGGGAGTTACAAGGAGCTTAGAAAGCATGTGAGGTCTAAGCATCCGTTTTCACGACCTAGAGAGGTGGACCCCATACGAGAAGAAAAATGGAAGAGACTGGAGTGTGAAAGAGAACGGAATGATGTGATCAGCACGATTTTATCTTCAACACCAGGGGCTATGGTACTGGGGGATTATGTGCTCGAGCCAAATGACCATGCCTTTTATAGTGATGAGTATGATTCTGATGAGGAATATCTGGAGGATGATTTCTTCTCCATGAGGTCCATTGGTTTGGGGAGAACTGGTCGCTTTTTGTCGAATATTAGGTATAATCAGGACCGTGCTGCTGATTCTTTTGATGTTGATCATTTTGGTTTGCAGAGTGTTGCACCTACAAGATCTGCTGCCATCTCTGGACGTGGACTCCACAGGTTACTGTTAGGAAGGTCTAGAAGACGAAGGAGGCATAGGATACCGAATGCTGGCAGGTAA 978 0.4387 MAKVGKVRCKSRSQGHRATPCLLSCARKNLKNVNVKKSFAKASEKKDWEDATCSVCMEVPHNAILLLCSSYNKGCRPYMCATSHRYSNCFEQYKKEYTKATSVQSLQLETDNSNFDLNAGEPNDNTEVPELLCPLCRRQVKGWTVVEAARKSLNAKKRSCMQDDCSYVGSYKELRKHVRSKHPFSRPREVDPIREEKWKRLECERERNDVISTILSSTPGAMVLGDYVLEPNDHAFYSDEYDSDEEYLEDDFFSMRSIGLGRTGRFLSNIRYNQDRAADSFDVDHFGLQSVAPTRSAAISGRGLHRLLLGRSRRRRRHRIPNAGR* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01848 325 PANTHER OS01G0612600 PROTEIN 1 276 - -
Rops10g01848 325 Pfam Protein of unknown function (DUF1644) 49 212 IPR012866 -
Rops10g01848 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 186 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01848 Rops-Chr10 34186660 34194335 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01848 - - gmx:100819473 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01848 10 34186660 34194335 Rops10g01848 10 34186660 34194335 ECH