Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01837 ATGGCTGCTTTACTCTCCAACCAATCTCTGTTGGTTTATTGTCCTTGTTCTACTTCTTTCTCTTCAAAGCCCTCTCAAACTTTACAACCCAAAATCCTACCTATCCCATCTCGCCCCACTAATGCCTTCATTTTAGGGTTTCCAACCTCGCTTTCCTGTGTTAATCGAAGGACCCTCTTCAAGCCTTATCTTGCTTCCCAAGATTCCCATCCAATTACGAATAATGAAACAGAGGAGACTCAGAATGATGTAAGGGTGACAGATGATGATGAAGATCAGAAACCTTTACCCAGTTTAATGGTTCTAATTGAAGCATACAAGGAAGCCTTTCTTAATGGTGATGAAAAAACTGTATCTCTTATTGAAGAGAGACTACTTTCAGTGGAAAGTGAAAAAAATAAATTGATTCAGAAAGTATCGACTCTATCGGCGAACAAAGTTGATTACAAGAAGGATTATCTCCGTTTACAAGCAGATTTTGATAATTTTAGGAAAAGATCTGACAAAGAAAGACTTAACATCCAATCTGATTCTCAACAAGAAGTCATTGAAAAACTTCTGTTGATGGTGGACAGTTTTGAGAAAGCCAAACAACAAATTAAAGCAGTGACAGAAAAAGAGAAGAAGATTGATGCAAGCTATCAAGGTATTTACAAGCAATTTGTAGAGATTATGAGGAGCCATCAAGTTTCTGTGGTAGCAACAGTGGGAAAGGCTTTTAATCCCTTGCTACATGAAGCCATTGCACGTGAGGAGTCCGTAGAGTTCAAGGATGGAATTATAATTAAAGAATCCCGACGTGGTTTTATGCTCAGAGATCAGGTTATAAGGCCAGCACTTGTGAAGGTTTCCTTAGGTCCTGGCAATAAGAAATCTGCAGCAGCTCCTGTCAAGTCCCAGGAGCAGCCTTCAACAGCTGCTGGAATAGATGAAAGATAG 939 0.3951 MAALLSNQSLLVYCPCSTSFSSKPSQTLQPKILPIPSRPTNAFILGFPTSLSCVNRRTLFKPYLASQDSHPITNNETEETQNDVRVTDDDEDQKPLPSLMVLIEAYKEAFLNGDEKTVSLIEERLLSVESEKNKLIQKVSTLSANKVDYKKDYLRLQADFDNFRKRSDKERLNIQSDSQQEVIEKLLLMVDSFEKAKQQIKAVTEKEKKIDASYQGIYKQFVEIMRSHQVSVVATVGKAFNPLLHEAIAREESVEFKDGIIIKESRRGFMLRDQVIRPALVKVSLGPGNKKSAAAPVKSQEQPSTAAGIDER* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01837 312 Gene3D - 114 226 IPR013805 -
Rops10g01837 312 MobiDBLite consensus disorder prediction 286 312 - -
Rops10g01837 312 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 231 285 IPR009012 GO:0006457
Rops10g01837 312 CDD GrpE 148 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops10g01837 312 PANTHER GRPE PROTEIN 92 290 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops10g01837 312 FunFam Protein GrpE 229 284 - -
Rops10g01837 312 ProSitePatterns grpE protein signature. 240 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops10g01837 312 Hamap Protein GrpE [grpE]. 67 285 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops10g01837 312 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 133 228 IPR013805 -
Rops10g01837 312 PRINTS GrpE protein signature 154 170 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops10g01837 312 PRINTS GrpE protein signature 182 197 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops10g01837 312 PRINTS GrpE protein signature 237 252 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops10g01837 312 PRINTS GrpE protein signature 264 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops10g01837 312 MobiDBLite consensus disorder prediction 68 92 - -
Rops10g01837 312 Pfam GrpE 128 284 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops10g01837 312 Gene3D Head domain of nucleotide exchange factor GrpE 230 284 IPR009012 GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01837 Rops-Chr10 34044661 34047675 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01837 K03687 - gmx:100809893 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01837 10 34044661 34047675 Rops10g01837 10 34044661 34047675 ECH