Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01833 ATGGCGGAAAGTTCCGAATTCATTGACCTGAAGCTTTCTCCTGTGAAGCTCCCCACCGATAATCTTCAAGATCCGCCGTTAAAAACTAATCGACGGCGCCGGCGAGGGGACACGTGGGTGGTATCGGTGTTGGTAATAATCCACATTGGTGCTTTCATCGCCACGATGCTCGTCAATGATTGCTGGACCAATTCTCACGGTGATTGCACTCTCCCTTCACTCGGAAGGTTCTCGTTTCAACCTCTCTCTGAGAATCCCCTCTTAGGTCCTTCCCAGTCCAAGTTAAATGAAATGGGAGCACTTCGAAGAACCTTTTTGACAGAAGATCATCAAACTTGGCGTCTTTTCACGTTTCCATTATTGCATGCTGGACTTTTCCACCTTGTCATTAATATCTGCAGTGTCATCTATGTGGGAATTCATCTAGAGCAAGAGTTTGGACCATTGAGGATTGGTTTAATCTATATGCTGTCTGCTTTTGTGGGTTCCTTGGTGGCATCTCTTTTTCTCCAAAACACCCCAGCTGTTGGTTCTTCCGGTGCTTTATATGGATTACTGGGAACATTGCTTTCTGAACTTGTTTGGAACTGGAAATTTCATACCAATAAGGGTTCTGCAATAGCATCATTAGTCTTTGTCTTTGTGGGCAATTTCGTCCTTGGATTTCTGCCTTATGTGGACAATTTTTCAAGCATTGGAGGTTTTATATCAGGATTCCTTCTTGGATCCGTTCTTTTATTCAGCCCTCAGCTCCAACAAATAGCTCCAAATAAAGGAGGTCTCATTGATTATGATGTCAAAAGTTACGTCAAGTTAAAGTTGAAGCAAAATCTGGACAGACCAGTTCTCAGGATTGTTTCTCTTACCCTCTTCAGCCTATTATTGGCTGGTTGTCTTGTAGCAGTTCTTCATGGGATCAACATCAACAGTTATTGCACATGGTGTCCATATGTTGACTGCATCCCTTTTACAAGCTGGCACTGCAAAGACAGAGAAACCTCTTGTGAGACAATGGTGAGCAATGCTCAGCTAACAATGACCTGTATGGTGAATGGCAACTTCAGGGTCTTTCCTTTTACCAACATCTCTCGGGCAAGGATGAATGATTTGTGCAACCTGATATGCTGA 1128 0.4353 MAESSEFIDLKLSPVKLPTDNLQDPPLKTNRRRRRGDTWVVSVLVIIHIGAFIATMLVNDCWTNSHGDCTLPSLGRFSFQPLSENPLLGPSQSKLNEMGALRRTFLTEDHQTWRLFTFPLLHAGLFHLVINICSVIYVGIHLEQEFGPLRIGLIYMLSAFVGSLVASLFLQNTPAVGSSGALYGLLGTLLSELVWNWKFHTNKGSAIASLVFVFVGNFVLGFLPYVDNFSSIGGFISGFLLGSVLLFSPQLQQIAPNKGGLIDYDVKSYVKLKLKQNLDRPVLRIVSLTLFSLLLAGCLVAVLHGININSYCTWCPYVDCIPFTSWHCKDRETSCETMVSNAQLTMTCMVNGNFRVFPFTNISRARMNDLCNLIC* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01833 375 Gene3D - 33 248 IPR035952 -
Rops10g01833 375 Pfam Rhomboid family 108 246 IPR022764 GO:0004252|GO:0016020
Rops10g01833 375 PANTHER RHOMBOID-RELATED 27 328 IPR002610 GO:0004252|GO:0006508|GO:0016020
Rops10g01833 375 SUPERFAMILY Rhomboid-like 36 250 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01833 Rops-Chr10 34011419 34013743 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01833 - - gmx:100775875 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01833 10 34011419 34013743 Rops10g01833 10 34011419 34013743 ECH