Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01831 ATGAGCAATTTGAGAACCCTATGTAGGCCTCACACGGTGTTCTCTTTCATTAGTTGCAGACACCAATTTCGAACTAGGGTTTCATTTCGGAACCCTAATTGCAAGACCCGTTTGCCATCACAATCGCTGTATTCTACATGGCTCGGTTCTTCGACCGTGCCCTGGTTTCGTGTGAATCAGAGGAGAACTGTGGCCAAAGCATCAAATTGGGCTGAACAAAAATCCCCATATGAAACTCTTGAATTGGAAGGAGATGCTGATGAGGAGCAGATAAAGAACGCTTATAGACGTTTGGCCAAATTTTATCATCCAGATGTCTATGATGGTAGAGGAACCCTTGAGGAAGGTGAAACAGCAGAAGCTAGGTTCATCAAGATTCAAGCTGCTTATGAATTGCTTATAGATGCGGAGAGGCGAAGACAGTATGACATGGATAATCGGGTCAACCCAATGAAGGCATCTCAGGCATGGATGGAGTGGCTCATGAAAAAGCGAAAAGCTTTTGATCAACGGGGTGATATGGCAATTGCTTCTTGGGCTGAGCAGCAACAGCGCGAGTTGAATATCCGTGTGCGCCAACTTTCTCGTTCAAAGATTGATCCAGATGAAGCAAGGAAGATCCTGGCAAGAGAAAAAAAGGCTTCAGCTGACTATTTCCACAGTACCCTTAAAAGGCACACACTTGTACTGAAGAAAAGAGATTTGATGAGAAAAAAGGCTGAGGAAGAAAAGAAGAAGACTATCAGCCAGCTATTAGCAGCAGAAGGTCTCGAGCTTGATTCAGATAGTGATGAGGCACTGTAG 804 0.4453 MSNLRTLCRPHTVFSFISCRHQFRTRVSFRNPNCKTRLPSQSLYSTWLGSSTVPWFRVNQRRTVAKASNWAEQKSPYETLELEGDADEEQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDAERRRQYDMDNRVNPMKASQAWMEWLMKKRKAFDQRGDMAIASWAEQQQRELNIRVRQLSRSKIDPDEARKILAREKKASADYFHSTLKRHTLVLKKRDLMRKKAEEEKKKTISQLLAAEGLELDSDSDEAL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01831 267 CDD DnaJ 76 135 IPR001623 -
Rops10g01831 267 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Rops10g01831 267 FunFam Chaperone protein dnaJ 61 166 - -
Rops10g01831 267 Gene3D DnaJ domain 57 159 IPR036869 -
Rops10g01831 267 SMART dnaj_3 74 138 IPR001623 -
Rops10g01831 267 SUPERFAMILY Chaperone J-domain 70 144 IPR036869 -
Rops10g01831 267 PANTHER CO-CHAPERONE PROTEIN DJLA 53 262 - -
Rops10g01831 267 Pfam DnaJ domain 76 143 IPR001623 -
Rops10g01831 267 ProSiteProfiles dnaJ domain profile. 75 146 IPR001623 -
Rops10g01831 267 PRINTS DnaJ domain signature 118 138 IPR001623 -
Rops10g01831 267 PRINTS DnaJ domain signature 164 183 IPR001623 -
Rops10g01831 267 PRINTS DnaJ domain signature 95 110 IPR001623 -
Rops10g01831 267 PRINTS DnaJ domain signature 77 95 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01831 Rops-Chr10 33995855 33998722 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01831 - - gmx:100808285 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01831 10 33995855 33998722 Rops10g01831 10 33995855 33998722 ECH