Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01828 ATGAAACAAATCAATCCTAAAGTGGTTTCTAGTTTGTGTACTCTTGCCCCCGATGGGGAACCCTGCATCACAGATTCCTTATCAGTCAGTGAGAATCCTACCACTTCATCTATAAGTGTGCAATCTACCCCTGAAATTGAAAAGAAGTTTGTCCATCATGTTTATGATGCTATTGCTCCGCATTTTAGTTCAACTCGGTTTGCCAAGTGGCCAAAGGTTGCCACATTTTTGTCATCTTTGCCTTTGGGATCTCTTGTCCTGGATGCAGGATGTGGGAATGGAAAATACTTAGGTTTGAATCCTGATTGCTTTTTTATAGGATGTGATATAAGTCCTTCCTTGATTAAAATCTGCTCGGATAGAGGGCATGAAGTTCTAGTTTCAGATGCTGTGAATCTTCCTTACAGAACTGGTTTTGGTGATGCGGCAATATCTATAGCCGTGTTACATCATTTAAGCACTGAAAACAGAAGGAGAAAAGCAATAGAAGAATTAGTCCGAATTGTTAAAAAGGGTGGCCTTGTTCTGATTACAGTATGGGCTGTAGAACAAGAGGATAGATCCTTGATTACCAAATGGACTCCACTTACAGAAAAATATGATGAAAAGTGGCAAGGATCAGGAAGTCCTTGTGCTTTGGCCCCTTCATCCTCATCTTTAAAAAGTATTCCTGAAAGTGAAGAGAGCAGCTCAAGTGAGCACATGAAAGCTTGCGATGAGTCAAAAGTATCAAGAGATCTGAAGGAAGAGAAAAACATGAAGAATCAACAAGAGTATTTTGTTCCTTGGCATTTACCTTATCATCGTGCTGAAATCAGTGGTTCTTCTGCTCATGCTCTCGCTACTGGTTTGGCGACTAAAGATGACCAAAAGGGTACTGTGGTGTATAATAGATATTATCATGTTTTCAGTGAAGGCGAGCTTGAAAGTTTGGCAACTGGAATAAACAACGCTAGAGTTGTTGATCAGTTTTTTGATAAATCCAACTGGTGTATTATTCTAGAGAAGACGTCATGA 1017 0.3982 MKQINPKVVSSLCTLAPDGEPCITDSLSVSENPTTSSISVQSTPEIEKKFVHHVYDAIAPHFSSTRFAKWPKVATFLSSLPLGSLVLDAGCGNGKYLGLNPDCFFIGCDISPSLIKICSDRGHEVLVSDAVNLPYRTGFGDAAISIAVLHHLSTENRRRKAIEELVRIVKKGGLVLITVWAVEQEDRSLITKWTPLTEKYDEKWQGSGSPCALAPSSSSLKSIPESEESSSSEHMKACDESKVSRDLKEEKNMKNQQEYFVPWHLPYHRAEISGSSAHALATGLATKDDQKGTVVYNRYYHVFSEGELESLATGINNARVVDQFFDKSNWCIILEKTS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01828 338 MobiDBLite consensus disorder prediction 227 245 - -
Rops10g01828 338 MobiDBLite consensus disorder prediction 210 226 - -
Rops10g01828 338 PANTHER UNCHARACTERIZED 43 336 - -
Rops10g01828 338 Pfam Methyltransferase domain 87 177 IPR013216 GO:0008168
Rops10g01828 338 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 36 202 IPR029063 -
Rops10g01828 338 Gene3D Vaccinia Virus protein VP39 62 338 IPR029063 -
Rops10g01828 338 CDD AdoMet_MTases 86 182 - -
Rops10g01828 338 MobiDBLite consensus disorder prediction 203 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01828 Rops-Chr10 33971647 33974639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01828 K10770 - gmx:100784028 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01828 10 33971647 33974639 Rops10g01828 10 33971647 33974639 ECH