Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01827 ATGTCGAGAATTACTAAATGGAAGATTGAGAAGACAAAAGTAAAGGTGGTTTTCCGGCTCCAATTCCATGCCACACATATTCCACAATCTGGATGGGATAAACTGTTTATCTCTTTCATCCCTGTTGACTCTGGGAAGGCTACATCAAAGACAACCAAAGCAAATGTGAGAAATGGAACCTGCAAGTGGGCAGATCCAATCTATGAAACTACAAGACTCCTCCAAGACATTAAAACAAGACAATATGAGGAGAAGCTTTATAAACTTCTTGTGGGGATGGGTTCTTCACGATCTAGCATCCTTGGCGAGGCAAACATCAATCTGGCTGATTTTGTTGACGCCTTGAAGCCTACAGCTGTTTCTTTGCCTCTCAATGGAAGTGAGCCTGGAGTCACACTACATGTCACGGTGCAGCTTCTCACTTCCAAAACTGGTTTCAGAGAATTTGAGCAGCAGAGGGAACTCAGAGAGAGGGGTCTACAGACGACAACCTCTGACGAAGGTGCTCATGATGAATCTGCTGATAGCAAAGAGTCATCTCCTGACCAGAATGTCAGTAATCATATGAATAAGGTCAACTCAAGAGTGAAATTGAAAAGAGAATCTAAAGATCTCCCCCATGTTTCTTCGCTCGAAGGAGAATCAGGGGTAAATGAAGAGTATGCAGATTCAGCCGCTGGATTCGATGGTTCTTCGACCACTTCTGAAAGCACATATACTGAGAAGCATGATATGTCCAGTACACATGAAGTGGACAGCCTCAAAAGCACAATCTCTGGTGATTTAGGTGTACTATCCCTCAGTCAAAGTCCTCAGCCAGAGAAAGGAGAGGCGCCTCATAATCAGTTTCCATCACAGGGCAGTGATTGGGTCGGGGGTTGGAGCATAGACTCTTCAGCTGTCAATAATTTGGCTGCTGCTTCTGAAGATGGTAGCAGTAGCAGACAAAAGGGAAATTTAGAAGCAGTTGAGTCATCTATTCTTGATCTTAAACAAAAGGTGAACTGCTTGCAAAGTCATGCTGATGAAATCGGTGTTGAGACATACAAGTTTTCTGAGCAACTTGCTGCTGAGATTTTGTCAGGAGAAGAGCTAACAAAAGATGTTGCTGTACTAAAATCAGAGTGTTCAAAGTTTAAAGATGAATTTGAGCAGCTTAAAAGTTCTAAGTTAAGGTTAGGATTTACTCTCAAAGAACATACTGAGACAGATCAGGATAAATTATTTCAAAATTTACAGCTTAAATGGCTTAAGGGGCTTTTGCTCATGGAAGATAAGTTAAGAGATATTCAGAAAGCGTGTATGGGATTTCCTGAAAGGGATTTTGGGTTCCTTAACTTGGAGTTAGACGCACTGGTTGAGATTTTGCAGAATCTCAAACAAGAATCCGGAGTGCCAATTTCAGGGACCAAAGTTGCCAATGGAAGAGAGAACAAGAAAATGGATTTACATAAAGATCAGCAATTTTTAACAGATGTTGGGTTGTCTGATGCAGGTTTATTTCAACCTGAAAGCATGGCTCATTATCTTACCATACCTGGCCTTGTGTCTCCTGAGTTTGATTCTGTAGATCCTACCCTTGCTATGAAAGAGAAAATTTTTGAACTTCTAAGAGAGTTAGATGAGTCCAAAACCGAAAGGGAAAGTCTTGTGCGGAAAATGGACCAGATGGAGTGCTACTATGAAGCTCTTATTCAGGAACTTGAGCAGAATCAAAGGCAGATGATGGCTGAGTTGCAGAACCTCAGGAATGAACATTCGACTTGCCTATACACAATTTCTGCTGGTAAGGCTGAGGTGGAGAGAATGCACCAGAATATGAACGAGCAGATAATGAAATTTTCTGAAGACAAGCGCATTTTGGATTCTCTCAACAGTGAGTTTGAAAGAAGGGCTATTGCTGCAGAAGCAGCCCTCAAAAGGGCTAGATTGAACTATTCTATTGCTGTCGGTCAATTGCAAAAAGATCTCGAACTGCTTTCTTGCCAGGTTCTTTCTATGCATGAGACAAATGAGAATCTCATAAAGCAGACCTTTTCTGATTCTTCACTTCCAAACACTGATGGTTGCTCAGAACCTGTGAAATATCCTAAAATTTCAGAAGGTCATACTTCCAATCAATTGCTACGTCAAAATCACAGTTCTTCCTTACCTAGACAACAGTTGGGTGAAGACATTTTACTAAGCGATTTGAAAAGATCACTTCAGTTGCAAGAGGGGTTATACAAACAGGTTGAAGAAGAAATCTGCCAAATGCATTTTGTAAATATATACTCAGATGTTTTTTCTATGGCTCTACAAGAAACGTTGCTTGAAGCAAGTCTTGACATTCAACTCATGAAAGAGGAAATTGTTCGAGTCTCTCATCAGCTGGAGCTTACAAATGAATCCAATGAGTTGCTGGTGCTGAGGCTGCAGAATGCTATGAATGATATCCTCTCATTAAATGAATACAAGGAGATCTGCACAGCAAAGAACAATGATATTGCTCACCAGAACCAAATGTTAGAAGCAAATTTAAAAGATCTTGCTCATGAAAACAATCTTCTTACTCAGAAGATTAATGAGTTGGAAGTTCTTCTGACAGATCACAGAAGTTTGGAGGGCAAATATATAGCATGCAGTGCAGAAAACTCAGAGTTGAAGAGTTTATTGAAAAAGGAAAGCCAGGAAAATGATCATCTTCATGATAAAATATCCATTTTGCAGGAAGAGTTAAAAGCTATCAGAACTAAATTTGATGAGCTGGCTTCTATGAAGGATAATCTGTCGAATAATGTTGTCTTTTTGTCTAATAAGTTGCAGAAATTGCTGGCATCATATGAAGATAGATATAGTGAACTTTCTCTTTGTAGTAGATCTGCTTGTTTGGATTCAGAATGTAAAGACTTAGAAGGTTTCTTATTGCAACTAGAAGAGTTGCAACAGAGTGCGTTTGATAGGATCCTGCAACTCATTGAAGAGAAAAAAATTTTAGTGAATGAAAAACATATGGCTCAAAAGTCTTTAAATACAGCAGAATCAGATTTTCTAGTCATGAAACAAAAGTTTGAGCATGATTTACAAGAGATGGGAAGTAACATAAGTGTGTCCAGTGCCCTGTCGCAGAAACTTCAGTTAGAGTTTGAGGTGATTGTTGACAAAATCAATGCTGGTTTTGAAGCTGGAGAAATATACTCTCAGCATCACAAGGATTTTTTGTCCAGTATTGATCATTTGGAAGCTGAGCTACAACAACTTAATTCCAGGAATCAGGACCTTGCTCAAGAAATTATAAAGCTAGATACTTCATCTAGTGACCTCGAAATGTGTAAGCTGACCTTAGCTGCAATCACAGAGGAGAAAAAAACTTTGGAGTTGTCTTTACAAGATAAAACAGAAGAATCTGACAATATTTCTTCTGAGCTTAATCTTTTCAAGGAAAACTTGTATTCTCTGCAAAATGAGTTGGATGCTGAGAAAACCTTCAGAGAAAAATTGGAGAAAGCAGTTACAGATCTTACAACAGAATTGAATGAGAAGCAATGCCAGCTGCAGGATTCTGATATGAACAGACAAGAACTGGTCCGTCTCAAGCAACTGGTCACAGACTTAGAATTTGAGAAATCAACATTCTCAGATCTTCTAAAGAAATCTGAGGAACATCTTGAAGATGCTTTAAAAGAATCTTCTTCTGGTAGTTGTCTGGAAACTCACTTATTGGAAATGCATGAATTTTCAATAGCTACAGATGTTGTTATGACTTTTACGAGAGCTCAGTTTGAGGGTCATACAGAGGAGCTTAGCAAGAAACTTAATTCCACTTGCAGCCAACTGGATGTGCTTCACAAGAAAAATCTTGATCTAGAATCTGAATTGAATGGCTGTCTTTGCAGAGAATTAGCTTGCATTGAAGAAAATACAAGATTGTTGACGGGTGTTGACTTCCTAAAATCTGAGTTAGAGGTCTCTACTTCTCAGTGTAGAGCACTAATTGATCAAAATAATGCAATAATATCAGAGCTTGAGGAGCACAAGAGTAGGACAGAGAATGTCAGCAATACTTCTTGTGAGCGTGAAAGCCAGCATGTCCTTGAGGTTGCTAGGTTGGAGCAATTGCTGGCAAGTTGTAGCAGGGATGGTGAAGAACTCTTTTTGTCCAAGGAAGAAGCTGAACTCAAATGTATAGTTCTCCAGGCCAAATTGGATGAACTGGAAACTGCAATTACTTCACTAAAACAATCAGATAATGAGCTGATAAGGCTACAGAACCAATGTAATGAGCTTTCCAAAAGGCTTTCTGAACAGGTTTTTAAGACAGAGGAGTTCAAGAATTTGTCTATTCATTTGAAGGAACTGAAAGACAAGGCTGAAGCTGAGTGTCTTAGTGCCCGTGACAGAAGAGGACATGAAGGACCACCGGTTGCTATGCAGGAGTCCTTGAGAATTGCATTTATCAAGGAACAATATGAAACAAAGTTGCAAGAGCTAAAACAGCAACTGTCTTTGTCAAAAAAGCATAATGAGGAAATGCTGTGGAAACTACAAGATGCAATTGATGAAACTGAGAATAGAAAAAAGGCTGAAGCTTCTCAAATAAAAATTAATGAAGAGCTGGGGACGAAGATCTTGGAATTGGAGGTTGAGTTACAGGCTGTACTTTCTGACAAACGTAATTTATCAAATGCTTATGACCTGATAAAGGCTGAAAAGGAGTGCTCAGTAATAACCCTCGAATGCTGTAAGCAAGAAAAGCAAGAGCTTGAAGCTTCTCTTCTAAAATGCAATAAGGAGAAGTCCAAAATTGAAGTAGAGCTTACTTTGGCAAAGCAAGAGCTTGAAGCTTCTCTTCTAAAATGCAATGAGGAGAGGTCCAAAATTGAAGCAGAGGTTACCTTGGCAAAGGAATTGATTGAGACTTTGAGATCTCGTGTGAATGGTCAAAATGAAGTCAATGACACATCCTCTTCTTCATTGAATCCTGAAGAAAAATCTACTCGTACAGCTTGCCATCATGAGCCAGAGAGTGCAAATTTGCTCATCAATATGCAACCAGAGGACCCTCTTGCATTTAGAGTTATGAATGGATGCCAAACTCTTGGAACTGAAGAGGACTTGCAACAGAATGAGGAAAAGAAGCATGTGGCTTTAACTGAAAGTTTGAAATCTAGCATTGACCACTTGAACAAGGAGTTGGAAAGGATGAAAAACGAGAATATGCTTCCTCCAGTGGATGGTGATAGCCATGAGCCAAGTTTTCCAGGTCTGCAAAGAGAACTGATGCAGCTACATGAGGCCAATCAAGAGTTAGGAAGCATATACCCTGTGTTCAATAAAATCTCTGTTGGTGGTAATGCATTAGAAAGGGTGCTTGCTTTGGAGATCGAGCTTGCTGAAGCATTGCAGGCCAAGAAGAAGTCAAGCATCCAATTTCAGAGTTCTTTCTTGAAACAACACAATGATGAAGAAGCAGTATTCCGAAGCTTCAGGGATATCAATGAGCTAATCAAAGACATGTTAGAAATAAAGGAAAGACATTCTTCTGTGGAGACAGAACTGAAAGAGATGCATGATCGTTACTCCCAATTAAGTCTTCAGTTTGCAGAGGTTGAAGGTGAGAGACAAAAACTCATGATGACTCTTAAGAATACTCGAGCATCCAAGAAGGTTTCAAATTCATCAACCTACATAGGGGACCATTCCTTGTAG 5688 0.3952 MSRITKWKIEKTKVKVVFRLQFHATHIPQSGWDKLFISFIPVDSGKATSKTTKANVRNGTCKWADPIYETTRLLQDIKTRQYEEKLYKLLVGMGSSRSSILGEANINLADFVDALKPTAVSLPLNGSEPGVTLHVTVQLLTSKTGFREFEQQRELRERGLQTTTSDEGAHDESADSKESSPDQNVSNHMNKVNSRVKLKRESKDLPHVSSLEGESGVNEEYADSAAGFDGSSTTSESTYTEKHDMSSTHEVDSLKSTISGDLGVLSLSQSPQPEKGEAPHNQFPSQGSDWVGGWSIDSSAVNNLAAASEDGSSSRQKGNLEAVESSILDLKQKVNCLQSHADEIGVETYKFSEQLAAEILSGEELTKDVAVLKSECSKFKDEFEQLKSSKLRLGFTLKEHTETDQDKLFQNLQLKWLKGLLLMEDKLRDIQKACMGFPERDFGFLNLELDALVEILQNLKQESGVPISGTKVANGRENKKMDLHKDQQFLTDVGLSDAGLFQPESMAHYLTIPGLVSPEFDSVDPTLAMKEKIFELLRELDESKTERESLVRKMDQMECYYEALIQELEQNQRQMMAELQNLRNEHSTCLYTISAGKAEVERMHQNMNEQIMKFSEDKRILDSLNSEFERRAIAAEAALKRARLNYSIAVGQLQKDLELLSCQVLSMHETNENLIKQTFSDSSLPNTDGCSEPVKYPKISEGHTSNQLLRQNHSSSLPRQQLGEDILLSDLKRSLQLQEGLYKQVEEEICQMHFVNIYSDVFSMALQETLLEASLDIQLMKEEIVRVSHQLELTNESNELLVLRLQNAMNDILSLNEYKEICTAKNNDIAHQNQMLEANLKDLAHENNLLTQKINELEVLLTDHRSLEGKYIACSAENSELKSLLKKESQENDHLHDKISILQEELKAIRTKFDELASMKDNLSNNVVFLSNKLQKLLASYEDRYSELSLCSRSACLDSECKDLEGFLLQLEELQQSAFDRILQLIEEKKILVNEKHMAQKSLNTAESDFLVMKQKFEHDLQEMGSNISVSSALSQKLQLEFEVIVDKINAGFEAGEIYSQHHKDFLSSIDHLEAELQQLNSRNQDLAQEIIKLDTSSSDLEMCKLTLAAITEEKKTLELSLQDKTEESDNISSELNLFKENLYSLQNELDAEKTFREKLEKAVTDLTTELNEKQCQLQDSDMNRQELVRLKQLVTDLEFEKSTFSDLLKKSEEHLEDALKESSSGSCLETHLLEMHEFSIATDVVMTFTRAQFEGHTEELSKKLNSTCSQLDVLHKKNLDLESELNGCLCRELACIEENTRLLTGVDFLKSELEVSTSQCRALIDQNNAIISELEEHKSRTENVSNTSCERESQHVLEVARLEQLLASCSRDGEELFLSKEEAELKCIVLQAKLDELETAITSLKQSDNELIRLQNQCNELSKRLSEQVFKTEEFKNLSIHLKELKDKAEAECLSARDRRGHEGPPVAMQESLRIAFIKEQYETKLQELKQQLSLSKKHNEEMLWKLQDAIDETENRKKAEASQIKINEELGTKILELEVELQAVLSDKRNLSNAYDLIKAEKECSVITLECCKQEKQELEASLLKCNKEKSKIEVELTLAKQELEASLLKCNEERSKIEAEVTLAKELIETLRSRVNGQNEVNDTSSSSLNPEEKSTRTACHHEPESANLLINMQPEDPLAFRVMNGCQTLGTEEDLQQNEEKKHVALTESLKSSIDHLNKELERMKNENMLPPVDGDSHEPSFPGLQRELMQLHEANQELGSIYPVFNKISVGGNALERVLALEIELAEALQAKKKSSIQFQSSFLKQHNDEEAVFRSFRDINELIKDMLEIKERHSSVETELKEMHDRYSQLSLQFAEVEGERQKLMMTLKNTRASKKVSNSSTYIGDHSL* 1896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01827 1895 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 140 IPR019448 -
Rops10g01827 1895 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 972 - -
Rops10g01827 1895 Coils Coil 1536 1556 - -
Rops10g01827 1895 Coils Coil 625 645 - -
Rops10g01827 1895 Coils Coil 442 462 - -
Rops10g01827 1895 Coils Coil 1603 1637 - -
Rops10g01827 1895 Coils Coil 533 585 - -
Rops10g01827 1895 Coils Coil 1480 1500 - -
Rops10g01827 1895 Coils Coil 1711 1731 - -
Rops10g01827 1895 MobiDBLite consensus disorder prediction 157 178 - -
Rops10g01827 1895 Coils Coil 1381 1425 - -
Rops10g01827 1895 Coils Coil 1063 1097 - -
Rops10g01827 1895 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Rops10g01827 1895 Coils Coil 1108 1142 - -
Rops10g01827 1895 MobiDBLite consensus disorder prediction 251 289 - -
Rops10g01827 1895 MobiDBLite consensus disorder prediction 227 241 - -
Rops10g01827 1895 MobiDBLite consensus disorder prediction 194 208 - -
Rops10g01827 1895 MobiDBLite consensus disorder prediction 157 289 - -
Rops10g01827 1895 Coils Coil 1571 1598 - -
Rops10g01827 1895 Coils Coil 728 748 - -
Rops10g01827 1895 Coils Coil 597 617 - -
Rops10g01827 1895 Coils Coil 826 860 - -
Rops10g01827 1895 Coils Coil 1825 1845 - -
Rops10g01827 1895 Coils Coil 1157 1177 - -
Rops10g01827 1895 Coils Coil 878 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01827 Rops-Chr10 33943624 33956459 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01827 - - pcin:129299741 2336.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01827 10 33943624 33956459 Rops10g01827 10 33943624 33956459 ECH