Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01814 ATGGTTATAATTAAATCTCTTCAATTTTTGCCTGCAATTATCACTGCTGCATTAAGGGAAGCAACCAGTAACCTTCACGAACCACTTAAAAGTGGTTCTGGTGACTCAATTAACTATGGTAATATGATGCATATTGGATTAGTGGGCATCAACAACCAGATGAGTTTACTGCAAGACAGTGGTGATGAGGATCAGGCTCAAGAAAGAATCAATAAGTTAGCCAAAATACTCAAAGACCAGGAGGTAGGCTCCACAATACACGCTTCAGGTGTTGGGGTAATTAGCTGTATCATACAAAGGGATGAAGGGCGTGCTCCTATGAGACACTCCTTTCACTGGTCAGCAGAAAAACTCTATTATGAGGAGGAACCTCTGTTGCGTCATCTGGAACCTCCTCTATCCATTTATCTTGAATTGGACAAACTTAAAGGCTATGAGAATATACGGTATACCCCATCTCGAGATCGTCAATGGCATCTGTATACTGTTGTGGATCACAAGCCACAGCCAATTCAAAGAATGTTTCTTCGAACGCTTCTCAGACAGCCAACTACAAATGAAGGATTCTCTTCGTATCAAAGATTAGATGCAGAAACATCTCGTACTGAATTGGCTATGTCCTTTACTTCAAGGAGCATTTTCAGGTCCTTGATGGCTGCAATGGAGGAGTTGGAACTTAATTCACACAATGCCACCATCAAATCTGAACATGCTCATATGTACCTCTATATCATACGCGAGCAACACGTAGATGATCTTGTGCCTTATCCCAAGAGAATTAACATAGATGCTGGTCAAGAAAAAACAACTGTTGAAGCAATCTTGGAAGAACTGGTTCGGGAAATCCATTCATCTGTTGGTGCACGAATGCATAGATTAGGGGTTGTTGTGTGGGAAGTCAAGCTCTGGATGGCAGACTGTGGACTGGCAAATGGTGCTTGGAGGGTCATTGTAAACAATGTGACTGGTCATACATGCACTGTACATATATACCGAGAAATGGAGGATGCCAGCACTCATAAAGTGGTATACAGTTCAGTCACTGCAAAGGGGCCGCTGCACGGTGTACCAGTGAATGAAAACTATCAACCTTTGGGAGTTATTGACCGAAAACGTCTTGCAGCAAGAAAGAACAGCACCACATACTGCTATGATTTTCCCCTGGCATTTGAAACATCCTTGGAACAGTCATGGGCTATCCAACTGCCAGGAATTCAAAGGGCCAAAGATAAAGATCTTCTAAAAGTAACGGAGCTTAAGTTTGCTGACAAAGAAGGTAGTTGGGGTACCCCACTTGTTCCTGTCGAGCATCCTCCTGGACTCAATGATGTTGGCATGGTAGCCTGGTTTATGGAAATGAATACCCCCGAGTTCCCATCTGGGAGGACAATATTGGTTGTTGCAAATGATGTGACCTTCAAGGCTGGTTCTTTTGGCCCACGAGAGGATGCATTCTTTCGTGCAGTAACTGATCTTGCATGTGCCAAAAAACTACCTTTAATTTATTTAGCAGCAAATTCTGGTGCTCGTTTAGGTGTAGCCGACGAAGTCAAAGCCTGTTTCAGAGTTGGGTGGTCAGAGGAATCTAACCCTGAGCATGGTTTTCAGTATGTATACTTAACACCTGAGGATTATGCTCGGATTGGATCGTCAGTGATAGCACATGAATTAAAGCTGGAAAGTGGAGAAACTAGATGGGTTATAGATACCATTGTTGGCAAGGAGGATGGCCTTGGGGTTGAAAACTTGAGTGGCAGTGGGGCCATTGCTGGTGCCTATTCAAGGGCATACAAGGAAACTTTTACATTGACATATGTGACTGGTAGGACTGTTGGAATAGGTGCTTATCTCGCTAGGCTTGGGATGAGATGTATACAGAGGCTTGATCAGCCCATAATTCTTACTGGTTTTTCAGCATTAAACAAACTTCTTGGTCGGGAGGTATACAGCTCTCACATGCAACTTGGTGGACCTAAAATCATGGCAACTAATGGAGTTGTTCATCTTACGGTTTCGGATGACCTTGAAGGTGTTTCTGCTATTTTGAAATGGCTTAGCTACATTCCTTCTCATGTAGGTGGTACACTTCCCATTGTAAAGCCTCTTGATCCTCCGGAAAGACTAGTGGAGTATTTCCCTGAAAACTCGTGTGATCCCCGTGCTGCCATTTGTGGAACTCTGGATGGTAATGGAAGATGGCTGGGGGGAATTTTTGACAAGGACAGCTTTGTGGAAACACTAGATGGATGGGCAAGGACAGTTGTTACAGGAAGAGCAAAGCTTGGAGGAATCCCTGTGGGAATTGTTGCTGTAGAAACACAGACAGTAATGCAAATAATACCTGCTGATCCAGGCCAGCTTGATTCTCATGAGAGGGTTGTTCCTCAAGCTGGGCAAGTTTGGTTTCCCGATTCTGCGACCAAGACAGCCCAAGCAATATTGGATTTCAACAGAGAAGAGCTCCCACTTTTCATTCTTGCAAACTGGAGAGGCTTTTCAGGTGGGCAAAGGGACCTTTTTGAAGGAATTCTTCAGGCTGGTTCAACTATTGTGGAGAACCTTAGAACATACAAGCAGCCCATATTTGTATACATCCCAATGATGGGTGAACTCCGTGGCGGGGCATGGGTTGTTGTCGACAGTCGAATCAATTCAGACCACATTGAAATGTATGCCGATCGAACCGCTAAAGGTAATGTCCTTGAGCCAGAAGGAATGATTGAGATCAAATTTAGAACAAGAGAATTGTTGGAGTGTATGGGTAGACTTGATCAACAGTTGATAACCCTAAAGGAAAAACTTCAGGAAGCCAAGAGTAACAGGGACTTTGGGACCATTGAATCCATACAGCAGCAGATTAAATCCCGTGAGAAACAGCTTTTGCCTGTGTATACACAGATAGCTACTAAATTTGCTGAACTGCATGATACTTCCTTAAGAATGGCTGCAAAGGGTGTGATTAGAGAAGTTCTGGACTGGGGTAACTCCCGTGCTGTCTTCTACCGGCGACTGCACAGGAGAATTGGTGAGCAGTCACTGATCAGAAGTGTGATAGATGCTGCTGGTGACCAGTTGTCACATATATCTGCGATGAACTTGCTCAAAAACTGGTACTTGAATTCTGATGTTGCCAAAGGTAGAGAAGATGCTTGGTTGGATGATGAAGCCTTCTTCAGATGGAAGGATAATCCTGCAAATTACGAGGATAAACTAAAGGAATTGCGTGTCCAGAAAGTGTTGCTTCAATTGACAAATATTGGTGATTCAACTCTGGATTTACAAGCTCTACCCCAAGGTCTTGCGGCCCTTTTAAGCAAGTTGGAGGCATCAAGTCGCACGAAGTTGACTGATGAACTTCGCAAGGTACTTGGTTAG 3375 0.4382 MVIIKSLQFLPAIITAALREATSNLHEPLKSGSGDSINYGNMMHIGLVGINNQMSLLQDSGDEDQAQERINKLAKILKDQEVGSTIHASGVGVISCIIQRDEGRAPMRHSFHWSAEKLYYEEEPLLRHLEPPLSIYLELDKLKGYENIRYTPSRDRQWHLYTVVDHKPQPIQRMFLRTLLRQPTTNEGFSSYQRLDAETSRTELAMSFTSRSIFRSLMAAMEELELNSHNATIKSEHAHMYLYIIREQHVDDLVPYPKRINIDAGQEKTTVEAILEELVREIHSSVGARMHRLGVVVWEVKLWMADCGLANGAWRVIVNNVTGHTCTVHIYREMEDASTHKVVYSSVTAKGPLHGVPVNENYQPLGVIDRKRLAARKNSTTYCYDFPLAFETSLEQSWAIQLPGIQRAKDKDLLKVTELKFADKEGSWGTPLVPVEHPPGLNDVGMVAWFMEMNTPEFPSGRTILVVANDVTFKAGSFGPREDAFFRAVTDLACAKKLPLIYLAANSGARLGVADEVKACFRVGWSEESNPEHGFQYVYLTPEDYARIGSSVIAHELKLESGETRWVIDTIVGKEDGLGVENLSGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVSAILKWLSYIPSHVGGTLPIVKPLDPPERLVEYFPENSCDPRAAICGTLDGNGRWLGGIFDKDSFVETLDGWARTVVTGRAKLGGIPVGIVAVETQTVMQIIPADPGQLDSHERVVPQAGQVWFPDSATKTAQAILDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPIFVYIPMMGELRGGAWVVVDSRINSDHIEMYADRTAKGNVLEPEGMIEIKFRTRELLECMGRLDQQLITLKEKLQEAKSNRDFGTIESIQQQIKSREKQLLPVYTQIATKFAELHDTSLRMAAKGVIREVLDWGNSRAVFYRRLHRRIGEQSLIRSVIDAAGDQLSHISAMNLLKNWYLNSDVAKGREDAWLDDEAFFRWKDNPANYEDKLKELRVQKVLLQLTNIGDSTLDLQALPQGLAALLSKLEASSRTKLTDELRKVLG* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01814 1124 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 1 1122 - -
Rops10g01814 1124 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 704 1019 IPR011763 GO:0016874
Rops10g01814 1124 Pfam Acetyl-CoA carboxylase, central region 1 354 IPR013537 GO:0003989|GO:0005524|GO:0006633
Rops10g01814 1124 Pfam Carboxyl transferase domain 456 1008 IPR034733 -
Rops10g01814 1124 Coils Coil 920 940 - -
Rops10g01814 1124 SUPERFAMILY ClpP/crotonase 695 1085 IPR029045 -
Rops10g01814 1124 Gene3D - 362 689 - -
Rops10g01814 1124 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 361 700 IPR011762 -
Rops10g01814 1124 Gene3D - 694 1093 - -
Rops10g01814 1124 Gene3D Biotin dependent carboxylase carboxyltransferase 512 576 - -
Rops10g01814 1124 FunFam acetyl-CoA carboxylase isoform X2 694 1093 - -
Rops10g01814 1124 SUPERFAMILY ClpP/crotonase 364 690 IPR029045 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01814 1 1124 Acyl Lipid Metabolism Gene Families AT1G36160 74.644 0.0 1776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01814 K11262 - gmx:100778658 2075.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01814 10 33741232 33746575 Rops10g01814 10 33741232 33746575 ECH