Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01812 ATGTTGTTAGGGAAGAGACCTCGTCCTCCTATGAAGAGAACCACAAGCATGTCAGAGATAACCTTCGATCTAAACACAGCCACTGAGGATGATCCCTTGAACCGACAGGGACAGGGACAAGGAGGAGGAGTTGGTGGGCCATCCCCATGGTCACCTGCTGGGTTCAACAACGGTTTAGATCAGAGCAGGGTTTTGGCCATGGTTTCACCCAGAAACCATCGAAGGCATTCTGCAGCAGATTTGGCACACACCCCTGATTTCTTGCGTCTTTGCTTTCTCTGCAAACGCCGTTTGGCACCTGGCCGTGACATCTACATGTACAGAGGTGATAGTGCTTTTTGCAGTCTAGAGTGCCGTCAACAGCAGATGAACCAGGACGAGAAAAAGGATAAGTCTTGTGTGGCATCAAAGAAACAAGTTGTGGTTCCGTCTTCTGGGTCTCAAGTCACTACCAAAGGTGAAACCGTGGTTGCCACAAAATCGTAG 486 0.4959 MLLGKRPRPPMKRTTSMSEITFDLNTATEDDPLNRQGQGQGGGVGGPSPWSPAGFNNGLDQSRVLAMVSPRNHRRHSAADLAHTPDFLRLCFLCKRRLAPGRDIYMYRGDSAFCSLECRQQQMNQDEKKDKSCVASKKQVVVPSSGSQVTTKGETVVATKS* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01812 161 Pfam zinc-finger of the FCS-type, C2-C2 82 129 IPR007650 -
Rops10g01812 161 ProSiteProfiles Zinc finger FLZ-type profile. 86 130 IPR007650 -
Rops10g01812 161 MobiDBLite consensus disorder prediction 1 57 - -
Rops10g01812 161 PANTHER FCS-LIKE ZINC FINGER 5 1 148 - -
Rops10g01812 161 MobiDBLite consensus disorder prediction 14 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01812 Rops-Chr10 33696391 33697503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01812 - - cam:101511560 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01812 10 33696391 33697503 Rops10g01812 10 33696391 33697503 ECH
Rops9g01529 9 26090449 26091582 Rops10g01812 10 33696391 33697503 PCT