Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01810 ATGGCCGCTGAAGTATATCACCAGGCTATTGGCACTTTGCTGTCCCATTCTTATCTTAATAATTTTAATCATCACCAAAAGCATCAGAACAATTTAGTAAGATTGGTGACAAAGGATTTTATCCGTAGTAATGGCTTGTTAAGGAGAGGAAGTAACCACTTTGGCCAGAGGAATTGTAGTGTAATTCGATCTTCAGCCTCCCAAACATCAGTTGTTGATCCAGTGTCATCCCCTTCAAGAAGCAACACTGGTGACAGTAACAAGAAATCAAATGAAGCAGCTTTGATTCTCATTCGGCATGGTGAGTCACTGTGGAATGAAAAGAATTTATTCACCGGTTGTGTTGATGTCCCACTAAGCAAGAAGGGTGTAGATGAGGCAATTGAAGCTGGAAAAAGAATTAGCAGCATTCCTGTAGATGTCATATTTACATCTGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGTAGGAAGGTGCCTATAATTATGCACAATGAGAGTGAACAAGCAAGGGCTTGGAGTCAAGTTTTCAGTGAAGATACAAAAAAGCAGTCCATTCCAGTCATAGCAGCTTGGCAACTAAACGAAAGAATGTATGGGGAACTACAGGGTCTCAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTCCATGAGTGGCGCCGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAGATGTGTGCTCAAAGAGCGGTTGCCTATTTCAGAGACCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTGCTGCCCATGGGAATTCATTGAGATCCATTATCATGTATCTCGACAAATTAACTTCCCAAGAGGTCATTAGTTTAGAACTGTCAACTGGAATTCCCATGCTTTACATTTTGAAAGAGGGAAGATTCATTAGGAGGGGAAGTCCCATAGGGCCGACTGAAGCTGGGGTTTATGCCTACACTAGGCGTTTGGCTCTTTACAGGCAGAAGTTGGATGAGATGTTCCAATAA 1038 0.42 MAAEVYHQAIGTLLSHSYLNNFNHHQKHQNNLVRLVTKDFIRSNGLLRRGSNHFGQRNCSVIRSSASQTSVVDPVSSPSRSNTGDSNKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGVDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARAWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAQRAVAYFRDQIEPQLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYILKEGRFIRRGSPIGPTEAGVYAYTRRLALYRQKLDEMFQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01810 345 SMART PGAM_5 94 280 IPR013078 -
Rops10g01810 345 Pfam Histidine phosphatase superfamily (branch 1) 95 167 IPR013078 -
Rops10g01810 345 Pfam Histidine phosphatase superfamily (branch 1) 190 297 IPR013078 -
Rops10g01810 345 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 92 319 IPR005952 GO:0006096|GO:0016868
Rops10g01810 345 Gene3D - 84 317 IPR029033 -
Rops10g01810 345 CDD HP_PGM_like 95 314 IPR013078 -
Rops10g01810 345 PANTHER PHOSPHOGLYCERATE MUTASE 84 331 IPR005952 GO:0006096|GO:0016868
Rops10g01810 345 SUPERFAMILY Phosphoglycerate mutase-like 95 311 IPR029033 -
Rops10g01810 345 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 97 106 IPR001345 GO:0003824
Rops10g01810 345 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01810 Rops-Chr10 33671361 33675488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01810 K01834 - gmx:100802621 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01810 10 33671361 33675488 Rops10g01810 10 33671361 33675488 ECH
Rops9g01525 9 25742302 25745606 Rops10g01810 10 33671361 33675488 PCT