Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01782 ATGGCCACCGCCGAATCCTCCGCCCACCACATCGAGTCTCTTCCCCTCGTAGACCTCCGCCTCCTCTCTCAATCTGAATTACACTCCATCTCCCTCTCCTCCTCCGCTGGCCTCCCCCGCCGCTCCGAAGACGATACGGTAATCCCCAAAATTGACCGTTCAGTCTTCAATGAGTCCGCGGGTAGCCGTAAACAAACATTTTCGCGTCTCCGCCTTGCCCCTCGCAACAAACAAAATTCTTCCGTTCCCGCCCCTTCCTCCTCTTCGTTCCACATTCCTCTCCCCATTCAGGAGCCCGTGGACGAAGAAAATTCCCAAATTATCGCTAGTCTCCAACAACTATTCGGCGTTGAGTCTCTTCGCAACGCCGACGCGGGTGACGACCGCCTCGTTCCTGTCCAGGTTGAATTCAAACAACCATCCCCAGAATCTGCGGCCCTGGCCTTCCAGAACATTCCCATCGACGTTGTTCACAGTAGTCAGGGAAAGCGGAAGCGCGGTAGGCCGCGCAAGAACGGGGATTCGGGGACACGATTGGAAGACAGCGAGGCCGAAACGAAGGCAGTGGTGTTGGTCAAGGAGCAGAAGGGTTTTGCTGTAAACGCAGTTGGGTTGGAGGATGTTGGGGATCCCTTTGCGGAGGAGTTGATAGAGAGGACTCAAGGGTTGAAGACAGAGTCCCAGTTATTGGAATTCTTGGAGTCATTGAATGGGGCATGGGGGAGTCAGAGAAAGAAGAGGAGGATTGTTGAGGCCAGTGATCTGTGTAACTTGCTGCCTACCGGATGGAAGATTGTGCTTACTCTTAATAAAAGAGCAGGTCGTGCTTCCGTGGTTTGTCGCCGTTACATAAGCCCTGATGGACGCCAGTTTGAGTCATACAAGGACGTTTCTACATACTTGCTTTCTTTTTCTGGAGTTCAAGATCAGCATGTTGGTTATGTGCCTACAGGAGACATGAAGACTGATGCCGATGCAAGTTGTTTAGCTAGTACACATATATACTCTCATCATGAGAAGCAGGCCACCATATCATCAATTGGAAGTGAGAAGCTAAACACTTCTGATGAGAATTTCAATATTGATCTGGCTTTGGGCTGTAAATTGGGAGATAATACTAGTGGAACCTTTAGAGACTTTGGCTATCAAACTGGAGATATGCCACCATTGAAGGCTGATAAGAATGGTGCAAATTCAGTTCAGGATTGTTCTGTTGCGGAGGATAGAGTTTATAATGTACGTAATGAGAAATTGGTTGGTGCTAATGAGACTAGCGATGCTGCATGCAATCTATATATTCCTTTGGTCTTCACAACTCCTTTCTCCAATAGTAATGGTGGTATTGGTCAATTTTCTGAAGAAATGAATGCTGTCACATGCATAAAAAGTGGCAATACTAATTTTTCTAGTGAGGATAGAAATACGGGATGCTATGGAACTGTTCCCTGTGGAAATGAGCAAGCACATGTTGACAACAATGGGCTTGGGCTTTCTGTGAGATTAGTGGAAGAGCACATTCAGAAAATAGGTTCTGAAAGCAGCATGCTGACTCCAAATTCTGAAGGGAAAATATGTGCTGGTAACAATTTAGAGGATAGTCATCTTATTAACTCACTGGAGAACAGGGAGATTAGTGATGGAAAGCCTGTTAAGGATGACAAGCAACAGATTATTTCTACCAAGGATCAGTCTGAAATTAAAGATATTTCTACTAATGTTAAACTGCAGAGTTGTTTGGAAGGTTGTTCACTTGTCCCATCCTGGAATGAACTTAAAGATACATCTACAAACAGTATGGACTGGACACAGACTTCCATGTTGAAGGACTCTGCTGAGGGAAAGTTTTTTGATAATGATTTACCTACCTCATCCATTGATAAGAGAACATGTGTTCACAGTAATAATGTTTCTCTTAGCACTTGCACTAAAGATGCATCTGAGGCTGGTCGAGTTGACTTTACTCCTAAACTTGAAGTAGTTAAGGATTTTAGCTATAATTATGTTCCTCCAATTGAGGAAGTTGTGACAAGCTGTTTACAGAAAAGGAGTTCCCTGAATGACCAATTCACAATGGACAATCTGTTGGACAGAAGTTCTGAAATAACTGGTAATCAGCACCCTTCTGCTTTTCATGATAACATGAAGAATATCTCTGCTGGAACCTTTGATGCATGCGAAGCTGTTGATGCTGGTTGCATGAAGCCTCAGTTTGACATTGTTTCTTGCAGCAATGTTGCTGCAGATGCATATACATCGGCAAGCATTATGCAGGGAATATCACAAGGATGTGTGTCTGTTCCTCTCGGAGGAAGTATATTAAACCGGTTTGACAAGCAAAGTGATGATGGTGTTAATAAAGCAAATAAATCTTGCTCATCGGAGAAGGCCAAGAGTGAAGTTGAAATATTCCAAAATGACTCTATGGGTATGCCCCAATTCCGGTAG 2445 0.4466 MATAESSAHHIESLPLVDLRLLSQSELHSISLSSSAGLPRRSEDDTVIPKIDRSVFNESAGSRKQTFSRLRLAPRNKQNSSVPAPSSSSFHIPLPIQEPVDEENSQIIASLQQLFGVESLRNADAGDDRLVPVQVEFKQPSPESAALAFQNIPIDVVHSSQGKRKRGRPRKNGDSGTRLEDSEAETKAVVLVKEQKGFAVNAVGLEDVGDPFAEELIERTQGLKTESQLLEFLESLNGAWGSQRKKRRIVEASDLCNLLPTGWKIVLTLNKRAGRASVVCRRYISPDGRQFESYKDVSTYLLSFSGVQDQHVGYVPTGDMKTDADASCLASTHIYSHHEKQATISSIGSEKLNTSDENFNIDLALGCKLGDNTSGTFRDFGYQTGDMPPLKADKNGANSVQDCSVAEDRVYNVRNEKLVGANETSDAACNLYIPLVFTTPFSNSNGGIGQFSEEMNAVTCIKSGNTNFSSEDRNTGCYGTVPCGNEQAHVDNNGLGLSVRLVEEHIQKIGSESSMLTPNSEGKICAGNNLEDSHLINSLENREISDGKPVKDDKQQIISTKDQSEIKDISTNVKLQSCLEGCSLVPSWNELKDTSTNSMDWTQTSMLKDSAEGKFFDNDLPTSSIDKRTCVHSNNVSLSTCTKDASEAGRVDFTPKLEVVKDFSYNYVPPIEEVVTSCLQKRSSLNDQFTMDNLLDRSSEITGNQHPSAFHDNMKNISAGTFDACEAVDAGCMKPQFDIVSCSNVAADAYTSASIMQGISQGCVSVPLGGSILNRFDKQSDDGVNKANKSCSSEKAKSEVEIFQNDSMGMPQFR* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01782 814 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 249 325 IPR001739 GO:0003677
Rops10g01782 814 MobiDBLite consensus disorder prediction 158 183 - -
Rops10g01782 814 SUPERFAMILY DNA-binding domain 251 303 IPR016177 GO:0003677
Rops10g01782 814 Gene3D - 237 313 - -
Rops10g01782 814 MobiDBLite consensus disorder prediction 59 93 - -
Rops10g01782 814 Pfam Methyl-CpG binding domain 252 301 IPR001739 GO:0003677
Rops10g01782 814 MobiDBLite consensus disorder prediction 782 814 - -
Rops10g01782 814 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 341 IPR037472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01782 Rops-Chr10 33188467 33195175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01782 - - gmx:100780637 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01782 10 33188467 33195175 Rops10g01782 10 33188467 33195175 ECH