Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01779 ATGGCTTCGCGCTTTTTCTTCATCTTCTTCTCCAACCTCAAATCCTCTAAAACCCTAACCCTTAGGAACCCTAATCTGTTGTCCGCTGCCCCATTTTCCACCTCCTTCCTTGTCACCAAAACCCCTAAAAAGCTCAAGAAAAAACGCAAAACCAAAGACAGCCCCCGAATCAAGCTGGTCCAAACCGAACCGAACCGCATCCCCGAATTCGAGCGCATAGTGGAGCGCGATTCCCTCTTAAGATTCGTTACAAAATCCAAACAATTCCTCTCCAACCAACCGGAGCACGTTCTCCGCCTCGACGACGCCGGCAAGCTCCACCGCGAACTCGGCTTCCCTCGCGGCCGGAAAGTCTCCCGCTCCATCCTGCGCCACCCTCTCCTCTTCCAAACTTACCGTCACACCGACGGAAAAATGTGGTTAGGCTTCACTGACCTCATGGAAGACCTTTTCTCCGAGGAACAATGCATTATGGACTCCATGGAACAAAACCGCGTCGATAAAGTTCGGAAATTACTCATGATGTCGGCACGTAACCGCATTCCGTTAAGCAAAATTCATCACTGCAGAACCCTATTCGGTATCCCCGATGATTTCCGTGACCGGGTCGCTAAGTATCCGAATTATTTTAAGGTTGTTGTCGAGAATGATGGAATGAGGGTACTTGAGTTGGTTAATTGGGACTCTCTTTTGGCTGTGAGTGCAATTGAGAAGGAGTTTGTGATTGATGAGGATGGTGCTAAAAGGAAGTTTAAGTTTCCTGTGAAATATGGGAAGGATTTGGATTTGGATTTTGATGATGCAAGGAAGCTTAATTTGTTGAACACGCTTCCTTTGGTGTCTCCTTATTCTGATGGGTCTAAATTGGATGTGTGGACATTGGAAGCTGAGAAGTATAGGGTTGGGGTGATTCATGAGTTCTTGAGCTTGACTTTGGAGAAGAGGGCTTCTATTCATCACCTTGTGGAATTTAAGGAGGAGTTTAGTTTGACTAAGCATACTTATCAAATGCTTCTCAAGCAACCAAAAGCGTTTTATTTGGCTGGAACTGAGATGAATTGGGTTGTGTTCTTGAAGGATGCTTATGATCATAATGGTGTTTTGATTGAGAAGGACCCCCAAGTGCTTTTCAATGAGAAACTCTATAAGTATGCTCTGATGCACGAATTGGAACCTAGTTCTGATGTTGGGATGGAAAAGAAAGATTTAACTTAA 1215 0.4519 MASRFFFIFFSNLKSSKTLTLRNPNLLSAAPFSTSFLVTKTPKKLKKKRKTKDSPRIKLVQTEPNRIPEFERIVERDSLLRFVTKSKQFLSNQPEHVLRLDDAGKLHRELGFPRGRKVSRSILRHPLLFQTYRHTDGKMWLGFTDLMEDLFSEEQCIMDSMEQNRVDKVRKLLMMSARNRIPLSKIHHCRTLFGIPDDFRDRVAKYPNYFKVVVENDGMRVLELVNWDSLLAVSAIEKEFVIDEDGAKRKFKFPVKYGKDLDLDFDDARKLNLLNTLPLVSPYSDGSKLDVWTLEAEKYRVGVIHEFLSLTLEKRASIHHLVEFKEEFSLTKHTYQMLLKQPKAFYLAGTEMNWVVFLKDAYDHNGVLIEKDPQVLFNEKLYKYALMHELEPSSDVGMEKKDLT* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01779 404 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 45 393 IPR045040 GO:0003723
Rops10g01779 404 Pfam Plant organelle RNA recognition domain 66 387 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01779 Rops-Chr10 33153179 33156311 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01779 - - gmx:100813429 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01779 10 33153179 33156311 Rops10g01779 10 33153179 33156311 ECH