Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01758 ATGGCATGGTACACCACCACCAGACTTGGGCATTATTTGGCAGAAGCTTTAGGCTTTTCAATTAGCAAAAAAGTTTGGAGAGGAGAAGAGGAAGAGGGGGGCTTTTCAGTTGGCAAAAACGTTTGGAGAGAAAGAAACCATCGAAAAAGAGAATCGGAAAACAGAGGAAGGCTGGGGAAGAAGCAAGAATCAGAAACCATAGTGGAACAAAGGGTTTTTCTTCCTCGTGGTTGGAATCTACACTACAACGATAGGAATGGTGCACTGCAAAGGAGGAGACCGAAGCTACAGGAGTCTAGGAAAAAAATTATGGTATTGAGGATGGTTGCCATGTTTGGAGGGATGAGCGTTAAGGCTCCCACGAGTTTGTGTTTGGGTTTCAAACCAAAAAGGAAAGCAAACAACACACATAAGGTATGGCCGGCACACATGCGCAGCCGCCAAGGATATACTATTACTAGCGTGCTGTGCCCTGCTTCTGAGACAAACGTTATGGCGCTTAGTTTCGAGATTCTTGGTAGGTTCAACCGTGCTCGTGCTGCTAGATTGACACTCCCTCATTTTGTGTGTCAAACGCCTTTATTCATGCCAGTGGGAACACAAGGAACAATCAAAGGATTGACAACTAGTCAGCTTGAGGAAATTGGTTGCCAAATAATACTTGGAAATACTTATCACTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGTGGTCTTCACAAGTTTATGAATTGGCCACGGGCTATTCTTACAGACTCTGGAGGCTTTCAAATGGTTTCACTGTTACATCTTGCTGATATCACAGAAAAAGGCGTGACATTTCAGTCACCAGTAGATGGAAAGCCAATGCTTCTAACTCCTGAGGAATCAATTCAAATACAAAATAGAATTGGAGCAGATATCATTATGGCTCTCGATGATGTTGTAAAGACCACCATTACTGGTCCAAGAGTTGAGGAAGCTATGTATCGAACACTTAGATGGATAGACAGATGTATGGCAGCTCACAAGAGACCTCATGATCAGAACTTGTTTGGTATTGTTCAAGGTGGTTTAGATCCTGTATTGAGGGATATCTGTGTCAAAGGTATGGTGGAGCGCAATTTGCCTGGCTATGCCATTGGTGGTCTTTCAGGTGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGGATAAACCACGATATGTTATGGGAGTTGGTTATCCCCTTGACATTGTTGTTTGTAGTGCTTTGGGCGCTGACATGTATGACTGTGTTTATCCTACCCGTACAGCACGTTTTGGCACTGCTCTTGTTCCTGAGGGAGTATTGAAACTAAAACACAGAGCAATGGCTGATGACACCCGTCCAATTGATCCTACTTGCCCTTGTATGGTTTGCAAGAACTACACCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCTATGGGGTCTCAGCTTCTGTCATATCATAATTTATATTACATGATGCGGCTTAGCAGGGATCTACACTATTCAATAGTTGAAGGAAGGTTCCCAAAGTTTGTATGTGACTTTCTGCAGAAAATGTTCCCTAAAGGTGATGTTCCTGAATGGGTTTGCAATGCTATGGAGGTGGCTGGAATTGACATTTCTTCTTGCTGTGCTCCATTTTCATCACGCCATGAATCTGATTCCAAAGATGTATCTAAAGAATTTAATGAGTTAAAAATGACACAGACAGAGAGATTAATTTAG 1755 0.4302 MAWYTTTRLGHYLAEALGFSISKKVWRGEEEEGGFSVGKNVWRERNHRKRESENRGRLGKKQESETIVEQRVFLPRGWNLHYNDRNGALQRRRPKLQESRKKIMVLRMVAMFGGMSVKAPTSLCLGFKPKRKANNTHKVWPAHMRSRQGYTITSVLCPASETNVMALSFEILGRFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTTSQLEEIGCQIILGNTYHLALRPTSELLDEVGGLHKFMNWPRAILTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCMAAHKRPHDQNLFGIVQGGLDPVLRDICVKGMVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHRAMADDTRPIDPTCPCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMMRLSRDLHYSIVEGRFPKFVCDFLQKMFPKGDVPEWVCNAMEVAGIDISSCCAPFSSRHESDSKDVSKEFNELKMTQTERLI* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01758 584 Hamap Queuine tRNA-ribosyltransferase [tgt]. 167 528 IPR004803 GO:0008479|GO:0101030
Rops10g01758 584 Gene3D - 164 531 IPR036511 GO:0006400|GO:0016763
Rops10g01758 584 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 162 553 - -
Rops10g01758 584 SUPERFAMILY tRNA-guanine transglycosylase 165 528 IPR036511 GO:0006400|GO:0016763
Rops10g01758 584 NCBIfam tRNA guanosine(34) transglycosylase Tgt 169 529 IPR004803 GO:0008479|GO:0101030
Rops10g01758 584 Pfam Queuine tRNA-ribosyltransferase 177 529 IPR002616 GO:0006400|GO:0016763
Rops10g01758 584 NCBIfam tRNA-guanine transglycosylase 169 529 IPR002616 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01758 Rops-Chr10 32839975 32857635 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01758 K00777 - gmx:100819664 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01758 10 32839975 32857635 Rops10g01758 10 32839975 32857635 ECH