Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01755 ATGGCACTCTCTAATACATTGGTTTTGGGTTTATTTCTAGCAATCAACATGGCCCTGCCAACCTTAGCAACCGTTTACAACGTGGGAGACACTTCAGGTTGGGAAATCGGTGCTGATTATAGTACATGGGCTAGTGACAAGACCTTTGCAGTTGGTGATAGCCTTGTTTTCAACTATGGAGCTGGTCACACAGTGGATGAAGTTAAAGAGAGTGACTACAAATCATGCACCACAGGCAATTCAGTCAGTACAGACAGTAGTGGTGCCACCACCATTGCCCTCAAAACTGCAGGCACTCATTACTTCATATGTGCTGTTCCTGGACATTGTGCTGGTGGCATGAAACTTGCTGTTACTGTTAAGGCTGCTGCTTCTTCTACAACACCATCATCTGGGAAGGGTTCACCTTCTTCTGATGGCAGCACCACAGGCACACCCACCACCCCCACCACCACCACCACCACCCCCACCTCCTCCACTAAGCCAAATTCATCTTCAGCTAGTAGTCTCTCACCAATTGTTGCTGCGTTGATTGTTTCATGGGTCTCCTACTATGTTTTACGTCTGGAATGA 573 0.4747 MALSNTLVLGLFLAINMALPTLATVYNVGDTSGWEIGADYSTWASDKTFAVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSVSTDSSGATTIALKTAGTHYFICAVPGHCAGGMKLAVTVKAAASSTTPSSGKGSPSSDGSTTGTPTTPTTTTTTPTSSTKPNSSSASSLSPIVAALIVSWVSYYVLRLE* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01755 190 Gene3D - 22 127 IPR008972 -
Rops10g01755 190 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Rops10g01755 190 PANTHER BLUE COPPER PROTEIN 23 137 IPR039391 GO:0009055
Rops10g01755 190 MobiDBLite consensus disorder prediction 126 168 - -
Rops10g01755 190 FunFam Blue copper 22 126 - -
Rops10g01755 190 CDD Phytocyanin 24 120 - -
Rops10g01755 190 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Rops10g01755 190 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Rops10g01755 190 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01755 Rops-Chr10 32783270 32784309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01755 31 189 Miscellaneous Gene Families AT1G22480 50.000 5.04e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01755 - - gmx:100306522 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01755 10 32783270 32784309 Rops10g01755 10 32783270 32784309 ECH