Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01749 ATGGCCCAGCAGAAGAGGCTAAAAACTCTAGCTGACAACCTCAAAGACAAAGCCTCAGTTATCGCCGCTACTCTATCAATCAAGCGCCACGTGTCCTCCGTTCGCCTCCACGTCCTCCGTGCCACCACTCACACACTCTCGGCCCCTCCGTCAGAGGAAAAAATCGCCGCCGTCCTCGACGTCGGTCATGGCTCTCACCTTCTCCCACGTGCCTGCATCGACGCTCTCATGGATCGCCTTCACAAGACTCGAAGTGCCACGGTAGCTCTCAAATGTCTTTTCACGCTTCACAACGTTGCTATCAAAGGACCCTTCACTCTCAAAGATCAATTATCCTATTACCCTTCTTATGGTGGCCACAATTTTCTTAACCTATCAACCTTTCGAGATGACTCGGATGTTGAATCGTTGGAACTGAGTTCGTGGGTTCGTTGGTACGCGGGTGTTGTAGAACAGAGTTTAACGGTTTCAAGGATCTTGGGTTATTACTTAAGTACTTCTTCTTCAACCAAGAAAGATACCCAAGAAAAGAAGTCTTTGATTTTGGGGCTTTCAAACGCTGATTTGTTGTATAAAATTGAAGGTCTTGTGGTTTTCGTGGAACAAATAAGCCGTGTACCTGAGTCGTTGCATCTTCAGAGGAACGAGTTGGTGTATGAAATTGTGAGATTGGTGGGTGAAGATTATAGAAGTGTTCAAGGTGAGATTTTGTTGCGGTTGGAGGAACTTGGTGATAGAATTGATGAGGATATGGATGTGGGTGAGTTGAATGAGTTGGTGGGTTATTTGAAGAGATTGGAAGAGAGTCAAGAAAAGTTGGTGCTTTTGTTTGTGAATAGAAGAAGGAACAATGGGTTTTGGGATTTGATTAAGCAGATAAAGATGAAGGGGATGAAGAAGAAAGAGGAGACAGAGGGGAGGTGGCTCACGGTGGTGACGACCACCAACGCCACCGAGTTGACTCGGTCCACAAACCCGTTTCTTGATCCGGTCCCACCGTTAAGTTTTTCAACGGTAAGATGA 1023 0.4633 MAQQKRLKTLADNLKDKASVIAATLSIKRHVSSVRLHVLRATTHTLSAPPSEEKIAAVLDVGHGSHLLPRACIDALMDRLHKTRSATVALKCLFTLHNVAIKGPFTLKDQLSYYPSYGGHNFLNLSTFRDDSDVESLELSSWVRWYAGVVEQSLTVSRILGYYLSTSSSTKKDTQEKKSLILGLSNADLLYKIEGLVVFVEQISRVPESLHLQRNELVYEIVRLVGEDYRSVQGEILLRLEELGDRIDEDMDVGELNELVGYLKRLEESQEKLVLLFVNRRRNNGFWDLIKQIKMKGMKKKEETEGRWLTVVTTTNATELTRSTNPFLDPVPPLSFSTVR* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01749 340 Gene3D - 4 163 IPR008942 -
Rops10g01749 340 PANTHER CLATHRIN ASSEMBLY PROTEIN 10 310 IPR045192 GO:0048268|GO:0072583
Rops10g01749 340 Pfam ANTH domain 38 277 IPR011417 GO:0005543
Rops10g01749 340 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Rops10g01749 340 FunFam Putative clathrin assembly protein At4g40080 6 163 - -
Rops10g01749 340 SUPERFAMILY ENTH/VHS domain 35 161 IPR008942 -
Rops10g01749 340 CDD ANTH_N_AP180_plant 38 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01749 Rops-Chr10 32718461 32719832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01749 - - gmx:100788852 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01749 10 32718461 32719832 Rops10g01749 10 32718461 32719832 ECH