Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01747 ATGGGCAGCGTCCAAAGAGAGGATGAAGATAAGAGTATTATCCAATCACTGTTGCCAAGAGAGGTGGGTGTTCATCATCAAACTGAAGAGGAATTAGGATTTTACAAGAAGCTCTGGATTGAAACCAAGAAGCTATGGCTAATTGTGGGTCCCTCTATCTTCAGCCGCGTGGCAGCATTCACCATGAACGTGGTTACTCAAGCCTTCGCTGGTCACCTTGGTGACGTTGAACTCGCTGCCATTTCCATCGCCAACACCGTCATCGTTGGCTTCAATTTCGGCCTCCTTTTGGGGATGGCTAGCGCGTTGGAGACACTATGTGGGCAAGCGTTTGGGGCTAAGAGATATCACATGTTGGGTATTTACATGCAGAGGTCTTGGATTGTTCTGTTCCTCTGTTGTTTTCTGTTACTTCCCTTCTACGTTTTCGCTACTCCGATTCTCAAACTCCTAGGACAACCTGATGACGTGGCAGAGTGGAGTGGGGTTATGGCTATTTGGCTCATTCCTCTTCACTTCAGTTTTGCGTTTCAGTTTCCTTTGCAAAGGTTTCTCCAGTGCCAGCTCAAGACCGCTGTCATTGCTTGGGTTTCCTTGCTGGGTTTGGTGGTTAATGTTGTCACCAGCTGGCTCTTGATTTATGTGTGGGATTTTGGACTTCTTGGTGCTGCTATTTCTTTGGACATTTCCTGGTGGGTTTTGGTGTTTGGCATGTATGCTTATACTGCTTTTGGTGGATGTCCTTTAACTTGGACTGGTTTTTCCATGGAAGCCTTTTCTGGACTCTGGGAATTCCTCAAACTCTCTACTGCTTCTGGGGTCATGCTCTGCTTAGAGAACTGGTACTACAGGATACTGTTACTTATGACGGGCCAGTTGAAGAATGCCACTGTTGCTGTTGATGCCTTGTCGGTATGTATGACTATCAATGGGTGGGAGATGATGATTCCCCTGGCTTTCTTTGCTGGTACTGGGGTAAGGGTGGCGAACGAACTAGGTGCAGGGAATGGAAAATCAGCAAAATTTGCAACTCAAGTATCAGTGGCACAATCAACAGTTATTGGGATCCTTTTCTGCATTCTCATAATGATATTCCATGACCAGTTTGCTTACATATTCACCTCCAGCTCTTCTGTGCTTCAAGCCGTTGATGATATGGCATTCCTCTTAGCAATCACCATTCTTCTCAACAGTGTTCAACCAGTTTTGTCAGGAGTGGCCGTTGGTTCAGGATGGCAAGCATTCGTAGCGTACATAAACATAGGGTGCTACTACCTTATTGGGCTACCACTTGGAATTCTAATGGGATGGGTCTTCAAAACTGGTGTGGAGGGCATTTGGGGTGGGATGATATTTGGTGGCACCGCAATTCAAACGCTGATACTGTTGATAGTAACAGCGAGATGTGATTGGGAGAAGGAGGCTGAGAAAGCTAGCTCACTTGTAAAGAAGTGGTCAACCCCTAACCCAAATGGTCAAAATTAG 1485 0.4613 MGSVQREDEDKSIIQSLLPREVGVHHQTEEELGFYKKLWIETKKLWLIVGPSIFSRVAAFTMNVVTQAFAGHLGDVELAAISIANTVIVGFNFGLLLGMASALETLCGQAFGAKRYHMLGIYMQRSWIVLFLCCFLLLPFYVFATPILKLLGQPDDVAEWSGVMAIWLIPLHFSFAFQFPLQRFLQCQLKTAVIAWVSLLGLVVNVVTSWLLIYVWDFGLLGAAISLDISWWVLVFGMYAYTAFGGCPLTWTGFSMEAFSGLWEFLKLSTASGVMLCLENWYYRILLLMTGQLKNATVAVDALSVCMTINGWEMMIPLAFFAGTGVRVANELGAGNGKSAKFATQVSVAQSTVIGILFCILIMIFHDQFAYIFTSSSSVLQAVDDMAFLLAITILLNSVQPVLSGVAVGSGWQAFVAYINIGCYYLIGLPLGILMGWVFKTGVEGIWGGMIFGGTAIQTLILLIVTARCDWEKEAEKASSLVKKWSTPNPNGQN* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01747 494 CDD MATE_eukaryotic 41 477 IPR045069 GO:0042910|GO:1990961
Rops10g01747 494 PANTHER MULTIDRUG RESISTANCE PROTEIN 35 471 - -
Rops10g01747 494 Pfam MatE 51 211 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops10g01747 494 Pfam MatE 273 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops10g01747 494 NCBIfam MATE family efflux transporter 51 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01747 Rops-Chr10 32670187 32677525 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01747 K03327 - gmx:100500204 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01747 10 32670187 32677525 Rops10g01747 10 32670187 32677525 ECH