Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01744 ATGGCAGATGGAAAGGAAGGAGATGAAGATAGAAAGTTAAAGAGATTCCTTCTCATAATAAACTGCACCATGTTAGCCATAGGTACCTCCGGTGGTCCCCTCATAATGCGTCTTTACTTTATCCACGGCGGCAACCTTGTCTGGCTCTCCGGTTTCCTCGAAACCGCCGGATTCCCCTTCATGTTGCTCCCCCTCGCCGTCTCCTACATCCGCCGCCTCCGCCGCCTCTCCGCCGCCGAAGGCACAAAACTGAGGATGGTATCTATGAAGCCTCCTTTGTTTGTTTTCTCAGCTTTCGTGGGTATCCTCACTGGCCTCGATGATTATCTCTATGCCTACGGTGTGGCTCGGCTTCCAGTTTCCACTTCTTCGTTGATCATCGCCACCCAATTGGCCTTCACCGCTGTCTTTGCTTTCATCTTGGTGAGGCAGAAGTTCACTGCTTACTCTGTGAACGCCGTCGTTTTGCTCACCCTTGGTGCGGGGGTGTTGGCTATGCACACCAGTGGGGATCGCCCTGCTGGTGAATCTACTAAGCAATATGTGATGGGCTTTGTGTTGACCTTACTGGCTGCTGCATTATATGGGTTTGTTTTGCCCTTTGTGGAGTTTATTTATAAGAAGACTAAGCAACCTATCACTTACTCTCTTGTCATGGAGATTCAGCTTGTTATGTGCTTCTTTGCTACTCTTTTTTGCACTGTTGGGATGATCATAAACCATGACTTTAAGGTAATTCCGAGAGAAGCGAGACATTTTGGGCTTGGGGAATCTAATTACTATGTTGTGTTGGTTGGGAGTGTAATACTGTGGCAGGCTTTTTTCTTGGGGGCAATTGGGGTCATCTTTTGTGCCTCTTCTTTGTTATCTGGTATTTTAATTTCGGTGTTGCTGCCAGTAACTGAAGTCTTGGCAGTTATTTTCTACAAAGAGAAGTTTCAAGCAGAGAAGGGGGTTTCTCTGTTTCTCTCACTTTGGGGCTTCGTGTCTTATTTTTATGGTGAGATCAAACAAGCCAAGGAAAAGAAGAATCGCATCCCAGAAACCGAGCTGCCCCAAACTGTCTCTACTACTATTTCTGATTCATGA 1089 0.4674 MADGKEGDEDRKLKRFLLIINCTMLAIGTSGGPLIMRLYFIHGGNLVWLSGFLETAGFPFMLLPLAVSYIRRLRRLSAAEGTKLRMVSMKPPLFVFSAFVGILTGLDDYLYAYGVARLPVSTSSLIIATQLAFTAVFAFILVRQKFTAYSVNAVVLLTLGAGVLAMHTSGDRPAGESTKQYVMGFVLTLLAAALYGFVLPFVEFIYKKTKQPITYSLVMEIQLVMCFFATLFCTVGMIINHDFKVIPREARHFGLGESNYYVVLVGSVILWQAFFLGAIGVIFCASSLLSGILISVLLPVTEVLAVIFYKEKFQAEKGVSLFLSLWGFVSYFYGEIKQAKEKKNRIPETELPQTVSTTISDS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01744 362 PANTHER OS09G0467300 PROTEIN-RELATED 11 343 IPR030182 GO:0015211|GO:0016020
Rops10g01744 362 Pfam Purine nucleobase transmembrane transport 17 340 - -
Rops10g01744 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 86 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01744 Rops-Chr10 32582831 32584104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01744 17 344 Organic Solute Cotransporters AT1G28220 59.756 1.36e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01744 - - gmx:100803818 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01744 10 32582831 32584104 Rops10g01744 10 32582831 32584104 ECH
Rops10g01744 10 32582831 32584104 Rops9g00404 9 5451021 5452382 PCT