Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01739 ATGGCAGTTTGTTCAACGTTGTTCCCGTGCCGTTTTGCATTGCTGCAATTCCACGATTTCAATAACACCACAACGAAGTTGCAATTGCAAACGATGTCGTTATTGCCTTCAAAGTCACCTTTTCATTTAGCTTCCAATGCCAAATTCAACAGTACCAATCATCATGTCTTCCACAACCACAACCACAATCGAACCCTTTTCAAATTTCGAGCTTCAACCTCTTCCTCTGGCAATGGCAGTAACAGTGGCACCAAAGTGATTTTATTTAACTCTGCTATTACCATAACATTAGCCGTAGCTAATCGCGTGCTTTACAAACTCGCTCTTGTTCCTATGAATGATTACCCCTTTTTCCTCGCTCAGTTCACAACTGTTGGGTATGTTGTTATATATTTTAGCATCTTATATATCCGATATCGTGCTGGGATTGTAACCAATGAGATGCTATCAATTCCAAAATGGCGTTTTTTGATCATTGGGTTTCTAGAAGCTTTGGGGGTAGCTTCTGGAATGTCTGCTGGAGCCGTACTTCCTGGACCAGTCATACCCATATTGAATCAGACTTTTTTGGTTTGGCAGCTAATGTTTTCTACTCTTCTCTTGGGGAGAAGGTACTCGATCAACCAACTTGCTGGGTGCTTACTTGTAGCTGCTGGTGTTGTGGTATCTGTTGCAAGTGGCTCTAATGCAGGTCAGATGCTTTCTCAAGTGGAGTTCTTTTGGCCAGCATTGATGACAATTTCCTGTGCCTTTCAAGCTGGGGCTTCTATAATCAAGGAGTTTGTTTTCATTGATTCTGCCACTCGATTGAAGCACAAGTCACTGGACATATTTGTGGTCAATTCTTTTGGATCTGGGTTTCAGGCTCTTTTCGTACTTCTCTTTCTACCTTTACTTTCTAACTTGAAAGGCATACCACTTGTTCAACTTCCTTCGTATCTTAAAAGTGGTGCTGGTTGCTTTCTAAACCTTGGAGCTGATAAAGCAGGTTGTGCTGGTGCTCCCTTGCTTCCGCTACTTTACATAATTACCAATTTGGCATTCAACATATCCCTGCTTCATGTATTAAAAACTACTTCTGCAGTTGTTGCGTCTCTTGTGATGATGTTGTCAGTGCCGATTTCTGTTTATATTCTTTCCCTTCCATTGCCATATCTTCCTGAGGGAACAAACTTGAGCCCATTTTTTATGCTTGGCTGTGCAATTCTTGTATGTGGTCTTTTTCTGTACAACACAACACGACCTGCGAGGAGCAATTCTGAAGATGATTGA 1272 0.4167 MAVCSTLFPCRFALLQFHDFNNTTTKLQLQTMSLLPSKSPFHLASNAKFNSTNHHVFHNHNHNRTLFKFRASTSSSGNGSNSGTKVILFNSAITITLAVANRVLYKLALVPMNDYPFFLAQFTTVGYVVIYFSILYIRYRAGIVTNEMLSIPKWRFLIIGFLEALGVASGMSAGAVLPGPVIPILNQTFLVWQLMFSTLLLGRRYSINQLAGCLLVAAGVVVSVASGSNAGQMLSQVEFFWPALMTISCAFQAGASIIKEFVFIDSATRLKHKSLDIFVVNSFGSGFQALFVLLFLPLLSNLKGIPLVQLPSYLKSGAGCFLNLGADKAGCAGAPLLPLLYIITNLAFNISLLHVLKTTSAVVASLVMMLSVPISVYILSLPLPYLPEGTNLSPFFMLGCAILVCGLFLYNTTRPARSNSEDD* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01739 423 Pfam CRT-like, chloroquine-resistance transporter-like 87 410 IPR013936 -
Rops10g01739 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 227 - -
Rops10g01739 423 PANTHER PROTEIN CLT2, CHLOROPLASTIC 73 419 IPR013936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01739 Rops-Chr10 32461620 32469119 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01739 - - ccaj:109802647 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01739 10 32461620 32469119 Rops10g01739 10 32461620 32469119 ECH