Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01730 ATGGAGAACGACGAGAAACAAGCAATGATCCGTGACGTCGCGTTACAAGTTGTTCTGATCCTTCTTTTCATCTTCGTATTCCTGGGCATACACGGCGTTCCCCAAAAGCTTTTTGCAAAGCTCCGTTTCAGAAACAGAGCGAGCATCAACGCGAAGCGTCACTTCGTAAAAGGCGCTCAGCTTCTCGCACAAGCCAGATCCTCGAAGACCAAATCCAGATCCAGTTCCAACTCTTTGGCCAAAGAAGCCTTAGCCGAAGCTGAGAAAGCCATCGCACTTGACCCTAAGGATGCTGCCTCTTACCTTCTCAAATCCATGGCTCTTGATCTTCAAGGTTTTCGAACTTCCGCTCTCGACTCCATCGACGCCGCTCTTTCTCCTCTCGCCGCCCGTTCCCTCGCCGACAGCGAGAGAGGGGACGCGCTTCTCAAGAGGGCGGAGTTGAGAATCTCGGTGAGTCAGCGAGCACGAGTTGACTCGGCGCTGGCGGATTTGACCGAGTCGGTGAAGCTGAGTCCGAGAAACGCGAAAGCTTGGTGTCTGTTAGGGGAATGCTATGAGGGAAACAAGAATGAAGAGGAAGCAAGGAAGGCTTACAAGGAGGCTCTTCAGTTGGAGGCAAGTTTGTCTGCGGCTCAAGAAGCACTCAACAGGTTGGGTGCATCATAG 669 0.5247 MENDEKQAMIRDVALQVVLILLFIFVFLGIHGVPQKLFAKLRFRNRASINAKRHFVKGAQLLAQARSSKTKSRSSSNSLAKEALAEAEKAIALDPKDAASYLLKSMALDLQGFRTSALDSIDAALSPLAARSLADSERGDALLKRAELRISVSQRARVDSALADLTESVKLSPRNAKAWCLLGECYEGNKNEEEARKAYKEALQLEASLSAAQEALNRLGAS* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01730 222 Pfam Tetratricopeptide repeat 176 206 IPR013105 -
Rops10g01730 222 SUPERFAMILY TPR-like 81 213 IPR011990 GO:0005515
Rops10g01730 222 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Rops10g01730 222 Gene3D Tetratricopeptide repeat domain 74 154 IPR011990 GO:0005515
Rops10g01730 222 Gene3D Tetratricopeptide repeat domain 155 222 IPR011990 GO:0005515
Rops10g01730 222 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 6 81 218 - -
Rops10g01730 222 Coils Coil 195 215 - -
Rops10g01730 222 SMART tpr_5 176 209 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01730 - - gmx:100783725 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01730 10 32284333 32285299 Rops10g01730 10 32284333 32285299 ECH