Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01719 ATGGTGACTGCAGGTGCGCTATCTTCGACCTTCACTTTAGCACCTCCACTCCCCGGTCACTCCCTTCGCACAACTCAACCCTGGTTCGTATTCCCTCCTCGTAGGTTCAACACCAGAATGGAAGCCCAAGCCCAAGCCCATCCCAAGGAGGCCAAACTGTGGGGTGGAAGGTTTGAAGAGGGCGTAACCGCCACCGTTGAGCGTTTCACAGAATCGGTCTCTTTCGACAAGGAGTTATACAAGCATGACATAATGGGAAGCAGAGCACATGCATCAATGCTTGCTCAACAGGGTTTGATTAGTGCGAGTGATAAGGATTCTATTCTTCAAGGTCTTGATGAGATTGAGAAGCGCATTGAAAATGGTGAGTTCAATTGGAGAATGGACAGAGAGGATGTTCACATGAACATTGAAGCCGCACTCACTGATTTGATCGGCGAACCTGCGAAGAAGCTTCACACATCTCGAAGCAGAAATGATCAAGTTGTCACTGACTTACGACTCTGGTGTCGCGATGCCATTGATAGGATCCTACTAAGCATGAAACAACTTCAGGTGTCGCTGGTCACCCTGGCTTTGAACAACCAGGGTCTCATTATTCCTGGTTATACTCATTTGCAGCGTGCACAACCCGTTTTGTTAGAACATCTTCTGCTTGCGTATGTTGAAGAGATTGAGCGTGATGCCGGTCGTTTGATAGATTGTAGAGCTAGGATGAATTTCTGCCCCTTAGGGGCTTGTGCATTGGCCGGTACAGGGCTCCCCATTGATCGATTCATGACTTCGGAGGCCTTAGGATTTACAGCTCCCATGAGGAATAGCATAGATGCAGTTTCTGACCGAGATTTTCTACTGGAGTTTCTTTCTGCTAATGCCATCACAGCAGTGCATCTTTCTCGGCTTGGAGAAGAATGGGTATTGTGGGCTTCAGAGGAATTTGGATTTATCACACCAAGTGATTCTGTTTCAACTGGAAGTAGTATAATGCCTCAGAAAAAGAATCCGGATCCAATGGAACTTGTTCGTGGTAAGTCTGCCAGAGTCATAGGAGGTCTGGTCACTCTTCTTACATTGTGCAAAGGACTTCCCCATGCTTACAATCGCGATTTGCAGGAAGACAAAGAACCGGTATTTGACAGTGTTAAAACTATTTTGGGGATGCTTGAGGTATCAGCAGAATTTGCACTGAAAATTACTTTCAATCGGGAAAGAATACAGCAGACTTTACCTGCTGGTTATCTTGATGCAACAACCCTTGCTGATTATCTTGTTTATAAGGGAGTGCCATTTAGGACGTCTCATGATATTGCTGGAAAATCTGTTGCTTTATGTACGTCGAAGAACTGCCAATTGCTGGACTTGAGTCTTGATGAGCTGAGAAGTATTAATCCAGTCTTTGACAAGGATGTGTATGAATATCTCGGAGTGGAAAATGCGATCCAGAAATTCGTTTCTTATGGTTCCACGGGGTCCGCATGTGTTGCCAGCCAACTTGATTATTGGATTAAAAAACTTGAAATGAAGTGA 1527 0.4532 MVTAGALSSTFTLAPPLPGHSLRTTQPWFVFPPRRFNTRMEAQAQAHPKEAKLWGGRFEEGVTATVERFTESVSFDKELYKHDIMGSRAHASMLAQQGLISASDKDSILQGLDEIEKRIENGEFNWRMDREDVHMNIEAALTDLIGEPAKKLHTSRSRNDQVVTDLRLWCRDAIDRILLSMKQLQVSLVTLALNNQGLIIPGYTHLQRAQPVLLEHLLLAYVEEIERDAGRLIDCRARMNFCPLGACALAGTGLPIDRFMTSEALGFTAPMRNSIDAVSDRDFLLEFLSANAITAVHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGGLVTLLTLCKGLPHAYNRDLQEDKEPVFDSVKTILGMLEVSAEFALKITFNRERIQQTLPAGYLDATTLADYLVYKGVPFRTSHDIAGKSVALCTSKNCQLLDLSLDELRSINPVFDKDVYEYLGVENAIQKFVSYGSTGSACVASQLDYWIKKLEMK* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01719 508 FunFam Argininosuccinate lyase chloroplastic 279 436 - -
Rops10g01719 508 Pfam Argininosuccinate lyase C-terminal 413 480 IPR029419 -
Rops10g01719 508 Pfam Lyase 56 350 IPR022761 -
Rops10g01719 508 NCBIfam argininosuccinate lyase 53 500 IPR009049 GO:0004056|GO:0042450
Rops10g01719 508 PRINTS Fumarate lyase superfamily signature 325 341 IPR000362 -
Rops10g01719 508 PRINTS Fumarate lyase superfamily signature 152 170 IPR000362 -
Rops10g01719 508 PRINTS Fumarate lyase superfamily signature 197 215 IPR000362 -
Rops10g01719 508 PRINTS Fumarate lyase superfamily signature 281 308 IPR000362 -
Rops10g01719 508 Hamap Argininosuccinate lyase [argH]. 52 503 IPR009049 GO:0004056|GO:0042450
Rops10g01719 508 PANTHER ARGININOSUCCINATE LYASE 37 507 IPR009049 GO:0004056|GO:0042450
Rops10g01719 508 Gene3D Fumarase/aspartase (Central domain) 169 498 - -
Rops10g01719 508 Gene3D - 410 482 - -
Rops10g01719 508 ProSitePatterns Fumarate lyases signature. 325 334 IPR020557 GO:0003824
Rops10g01719 508 CDD Argininosuccinate_lyase 72 505 IPR009049 GO:0004056|GO:0042450
Rops10g01719 508 Gene3D - 72 279 IPR024083 -
Rops10g01719 508 FunFam Argininosuccinate lyase 51 156 - -
Rops10g01719 508 PRINTS Argininosuccinate lyase family signature 325 341 - -
Rops10g01719 508 PRINTS Argininosuccinate lyase family signature 243 259 - -
Rops10g01719 508 PRINTS Argininosuccinate lyase family signature 151 173 - -
Rops10g01719 508 PRINTS Argininosuccinate lyase family signature 360 379 - -
Rops10g01719 508 PRINTS Argininosuccinate lyase family signature 192 212 - -
Rops10g01719 508 PRINTS Argininosuccinate lyase family signature 281 305 - -
Rops10g01719 508 FunFam Argininosuccinate lyase 411 482 - -
Rops10g01719 508 SUPERFAMILY L-aspartase-like 53 505 IPR008948 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01719 K01755 - gmx:100796544 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01719 10 32157094 32160815 Rops10g01719 10 32157094 32160815 ECH