Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01659 ATGGAAGCAGTGATCGAGCCACCCACTAGTACATGCAGTCACTGCTATCGGGCTATCCCTGCTGCAAATATTGATTTGCATTATGCTCATTGCTCGCGGAACCTTGAAAAATGCGAAGTTTGTGGTGACATGGTTCCGAAACAACATGCTGAGGATCACTATTTAAGCACCCATGCGCCGGTTGCCTGTTCATTGTGCAGCGAGACAATGGATCGAGATATTTTAGATACCCATGAAGCTGAATATTGCCCCAAAAGGATTGTCACCTGTGAGTTCTGTGAGTTCCCATTGCCGGCAATTGATCTGGCTGAGCATCAGGAGGTATGTGGGAATCGAACAGAGATTTGTCACCTTTGTAACAAATATGTTAGACTACGGGAAAGATACAACCATGATGATAGTTGCAATAGAATCCAAGACAATGCTGTTGGGTCTCCGAGGGACGTGAGGCCAGCAGAAAGAGATGATGAGGGTGCTCCTAGAAGGCAACAAAATGAATTCTCAAGAAGACGTTTTCTTTTCACAATAGCAATCACTGGCATCGCTGTTATACTCGGATCTATTTTTTACCAGAGAAAGGCAGAGCCCAGTAATGTGCATTAA 603 0.4478 MEAVIEPPTSTCSHCYRAIPAANIDLHYAHCSRNLEKCEVCGDMVPKQHAEDHYLSTHAPVACSLCSETMDRDILDTHEAEYCPKRIVTCEFCEFPLPAIDLAEHQEVCGNRTEICHLCNKYVRLRERYNHDDSCNRIQDNAVGSPRDVRPAERDDEGAPRRQQNEFSRRRFLFTIAITGIAVILGSIFYQRKAEPSNVH* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01659 200 ProSiteProfiles Zinc finger TRAF-type profile. 49 93 IPR001293 GO:0008270
Rops10g01659 200 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 9 194 - -
Rops10g01659 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 111 IPR013083 -
Rops10g01659 200 MobiDBLite consensus disorder prediction 147 164 - -
Rops10g01659 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 57 IPR013083 -
Rops10g01659 200 MobiDBLite consensus disorder prediction 140 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01659 Rops-Chr10 30492256 30496988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01659 - - ccaj:109808130 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01659 10 30492256 30496988 Rops10g01659 10 30492256 30496988 ECH