Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01640 ATGGCCGCTCCTCCTACAAGGGACCAAATCCTCTCTCTCCTCGCCGCTGCCAACAACCATGGCGACCTCTCCGTAAAAACCTCCTCCTTGAAACAAGCCAAGGACCTTCTTCTCTCCATCGACCCTTCCCTCGCCTCCGACCTCTTCCCTTACTTGATCGAACTTCAGTCTTCTCCTGAAAGCCTTGTTCGCCAATTGCTCATTCAGATAATTGAGGAGATTGGTTTTAAGGCAGTCGAGAATTCTCCTACACTGATATCTGTACTATTAACATTTTTACGAGACAGCGATGTAATGGTTGTAAAGCAGTCTATTGTTAGTGGCACAAATATCTTCCGTAATGTTTTTGAAGAGATGATTGTGCAGTTTCAGCAACATGGTAAAGTTGAGAAGTGGCTAGCAGAGATTTGGACGTGGATGCTTAAATTCAAGGATGCTGTTTTTGGGATTGCTATGGAGCCTGTTTCTGTTGGAATAAAGTTGCTGGCACTGAAATTCTTGGAAACGTTTGTTTTACTTTTTACATCCGATGATCCCGAGAAATCAGCCACGGAAGGAGTTAGGCAAACTGTTAATATCTCATGGTTGGGGGGTCGTCACCCTGTTCTTGATCCAGCAATGCTCATGTCAGAGGCAAATAGGACTATTGGCATTCTATTTAATTTATTGCAGTATGCTGGCAGTCTCCCTGGTTGCTTGACAATCACTGTTGTAAATTGTTTATCAGCCATTGCAAGGAAAAGGCCACAACACTATGATAGTATTCTCTCAGCATTGCTTGATTTTGATCCAAATTTTCAAACAGTGAAAGGATGTCATGTTGCCAGTATTCAGTACTCCTTAAGAACAGCTTTTTTGGGGTTTCTAAGGTGCACTTATTCACCAATACTAGAGTCAAGAGAAAGACTGATAAGGAGCCTGCGAGCTATGAATGCAGGGGATGCTGCTGATCAGGTCATTCGGCAAGTTGACAAAATGATTAAAAATGGTGATCGTTCTACCCGTGATGCTCGAGTTAGTAAGGATGATCAACCACCAACTCAGCCACATGTTTCAGGGGAATTATCTAGAAAAAGACCCAGTCCTATAGATAATGAACATTTGGCCAATGGTCATGAGGCCTCTAAGCGGATTCGGTCTGGTCCTGACCCTCAGTTTACTTTACCAGCTCTAATAAATGATTCTGGGCAGGATCTTAACTCTGTTAATGGAGTATCCCCTAATGATCCTGTGCTGGATAGTGAACTAACTGCTGTGGAGCAAATGATTGCTGTGATTGGTGCTTTGCTCGCCGAAGGAGAAAGAGGTGCCGAATCTCTTGAAATCCTCATTTCAAAGATTCATCCTGATCTATTGGCTGATATTGTCATAACTAATATGAAGCACTTGCCTAAGACACCCCCACCACTAGCAAGGCTTGGGAATCCACCAGTAACTCGACAAGTAGGTTCCCAAGTAAGTCAATCGCAGGTTATAGCAGCATCTGCTCCAATAAATTCTGTCCAATCCTTGGCTGTTACTACCCAAGCACCATTCCCTTCAACTATGGCCACTGCTACTACCTCATCACCATCTGACACCTCTAACTTCAGTAACCAGCCTGCTGATTCTAAACGTGATCCACGCCGGGATCCCCGTCGCCTGGATCCACGGCGCGGAGTGGTAACTCCTGGAGGAGCAGCTGTATCAATTACAGATGATACTGGGGCCACAAGGTTAGAGTTTGATGATCCCATGTCTTCAGTAAAGCCTGTTTCACATCCTGTTGCAACCACCGATGACAATAAACCATCTGATCTCACAATCAAAATAAAAAATGAAGATATGATCTCTGAAGGGCCCCCAGTTTCAGGATCTGATCAGGCAACCCCCAAAACAGAGGTTCTGGAAAGGCCTGGAGGTATTCACCAGATTACAGAATCAAATGCTTCTTTGGATCCCTCACTCTCTTCCACTGATTTAAGGGATGAGGATCTGAGTGCAGTAAAGCTGTCTGATGATACTGAGACAAACGGGACAGATTCATCAGCTATTTTAGAGTTTGAACAGTTTTCTCTTGATGTTCAAGTTGAATCTACATTGGAAGATACCTGTCTTGAATTACCACAGCTTCCACCATACATTGAACTATCCAAAGAACAGGAAAATAAGGTGAAAACCATGGCTATTAGGCATATAATTGAGTCATTCAAGCAGTTACATGGGACAGATTGTCAGCAGTTTTGCATGCCCTTAATTGCTCGACTAGTAGCTCAGATTGATGATGATAATGAGTTTATTATGATGCTGCAAAAACACATCCTGGAGGACCACTGGAGAAAGGGGCATGAACTTGTACTGCATGTTTTGTACCATCTGCACTCCCTCATGATATTGGATTCGGTTGGAAACTCTTCATCTTCTGCCATTTTATATGAAAACTTTCTCTTGAGTGTGGCCAAAACTTTCTTGGATTCTTTTCCAGCATCAGACAAGTCTTTTAGTAGACTTCTTGGTGAAGTCCCACTTTTGCCTGAGTCTGCCTTGAAGATTTTGAGTGATCTCTGTTATTCTGATGTTATTGATTGTGAAGGAAGAATTATCCGTGACATTGAACGTGTAACTCAAGGCCTTGGTGCTATCTGGAGTTTAATTTTGGGCCGTCCTCAAAATCGCCAAGCCTGCTTAGGAATAGCACTGAAGTGTGCTGTCCACCCACAGGATGAGATTCGAGCTAAAGCTATTCGGCTGGTGACTAACAAGCTCTTTCAGCTTAGTTACATATCAGAAGATGTTGAGAAATTTGCAACAAAAATGCTTCTTTCCGCCGTAGATCATGAAGTTTCAGATACAGTGCAATCTGGACCTACTGAACAAAGAGCCGAGGCAGAGGTTGAAAGTCATGAAATGAGTGGTACTTCGCAGGTTTCAGAATCCACATTTTCTGAAAATGACTCTGCTAGAGCTGCTAAACCATTGATTCAAAGTGTTCCATCTATATCATTTCCTGAAGCTCAACGCCTCATTTCTTTGTTTTTTGCTTTATGTACAAAGAAACCCAGTCTTCTTCAGATTGTATTTAATGTCTATGGGCATGCCCCAAGAACTGTAAAGCAGGCTTTTCATCGCCATATTCCTGTTCTTGTGAGGGCATTAGGGCAATCTTATTCTGAATTGCTCCAAATCATATCTGATCCTCCACAAGGAAGTGAAAATCTTCTGACACTGGTACTGCAAATATTGACTCAAGATACAACACCGTCTTCTGATTTGTTATCCACCGTTAAGCGTTTATATGAAACTAAATTTAGAGATGTTACAATTCTTGTTCCATTACTGTCATCACTTTCCAAAAAGGAGGTTTTACCAATATTCCCTCGACTTGTAGACCTCCCATTGGAGAAGTTTCAGAGGGCCCTTGCTCACATACTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACACCTGTGGAAGTGTTGGTTGCAATCCATGGAATCGTTCCTGAGAAAGATGGCCTTCCACTTAAGAAGATAACAGATGCTTGCTCGGCTTGTTTTGAGCAACGTACAGTGTTCACACAGCAGGTTCTGTCAAAGGCATTGAACCAGATGGTTGACCATACTCCATTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAATTGATGCTTTTCCTACACTGGTTGATTTTGTTATGGAGATACTGTCAAAACTTGTGGCTAAACAGGTCTGGCGTATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAAACACAGCCACGTTCTTTTCATGTATTATTGCAGTTGCCACCTCAACAACTGGAAAGTGCACTCAACAAGCATGCCAATCTCAGAGGTCCCCTTGCTTCTTATGCCAACCAACCAAATGTAAAATCTTCCCTTACTAGATCAACTTTAGCAGTTCTCGGTCTTACAAATGAAACGCATGTCCAGCAACATTTGTCAACTTCATTGCACCCTTCTGATACAAGTTCTTCAGTTCACGGGGCAACTCTGACATGA 4011 0.4268 MAAPPTRDQILSLLAAANNHGDLSVKTSSLKQAKDLLLSIDPSLASDLFPYLIELQSSPESLVRQLLIQIIEEIGFKAVENSPTLISVLLTFLRDSDVMVVKQSIVSGTNIFRNVFEEMIVQFQQHGKVEKWLAEIWTWMLKFKDAVFGIAMEPVSVGIKLLALKFLETFVLLFTSDDPEKSATEGVRQTVNISWLGGRHPVLDPAMLMSEANRTIGILFNLLQYAGSLPGCLTITVVNCLSAIARKRPQHYDSILSALLDFDPNFQTVKGCHVASIQYSLRTAFLGFLRCTYSPILESRERLIRSLRAMNAGDAADQVIRQVDKMIKNGDRSTRDARVSKDDQPPTQPHVSGELSRKRPSPIDNEHLANGHEASKRIRSGPDPQFTLPALINDSGQDLNSVNGVSPNDPVLDSELTAVEQMIAVIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPKTPPPLARLGNPPVTRQVGSQVSQSQVIAASAPINSVQSLAVTTQAPFPSTMATATTSSPSDTSNFSNQPADSKRDPRRDPRRLDPRRGVVTPGGAAVSITDDTGATRLEFDDPMSSVKPVSHPVATTDDNKPSDLTIKIKNEDMISEGPPVSGSDQATPKTEVLERPGGIHQITESNASLDPSLSSTDLRDEDLSAVKLSDDTETNGTDSSAILEFEQFSLDVQVESTLEDTCLELPQLPPYIELSKEQENKVKTMAIRHIIESFKQLHGTDCQQFCMPLIARLVAQIDDDNEFIMMLQKHILEDHWRKGHELVLHVLYHLHSLMILDSVGNSSSSAILYENFLLSVAKTFLDSFPASDKSFSRLLGEVPLLPESALKILSDLCYSDVIDCEGRIIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCAVHPQDEIRAKAIRLVTNKLFQLSYISEDVEKFATKMLLSAVDHEVSDTVQSGPTEQRAEAEVESHEMSGTSQVSESTFSENDSARAAKPLIQSVPSISFPEAQRLISLFFALCTKKPSLLQIVFNVYGHAPRTVKQAFHRHIPVLVRALGQSYSELLQIISDPPQGSENLLTLVLQILTQDTTPSSDLLSTVKRLYETKFRDVTILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGLPLKKITDACSACFEQRTVFTQQVLSKALNQMVDHTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVAKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNKHANLRGPLASYANQPNVKSSLTRSTLAVLGLTNETHVQQHLSTSLHPSDTSSSVHGATLT* 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01640 1336 MobiDBLite consensus disorder prediction 327 343 - -
Rops10g01640 1336 Pfam Symplekin tight junction protein C terminal 1098 1276 IPR022075 -
Rops10g01640 1336 MobiDBLite consensus disorder prediction 943 975 - -
Rops10g01640 1336 MobiDBLite consensus disorder prediction 357 379 - -
Rops10g01640 1336 MobiDBLite consensus disorder prediction 961 975 - -
Rops10g01640 1336 Pfam Symplekin/PTA1 N-terminal 97 318 IPR032460 -
Rops10g01640 1336 MobiDBLite consensus disorder prediction 536 551 - -
Rops10g01640 1336 SUPERFAMILY ARM repeat 9 918 IPR016024 -
Rops10g01640 1336 Gene3D - 2 342 IPR011989 -
Rops10g01640 1336 MobiDBLite consensus disorder prediction 515 535 - -
Rops10g01640 1336 MobiDBLite consensus disorder prediction 515 599 - -
Rops10g01640 1336 MobiDBLite consensus disorder prediction 1317 1336 - -
Rops10g01640 1336 MobiDBLite consensus disorder prediction 327 393 - -
Rops10g01640 1336 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01640 Rops-Chr10 30108084 30134801 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01640 K06100 - gmx:100789876 2159.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01640 10 30108084 30134801 Rops10g01640 10 30108084 30134801 ECH