Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01628 ATGAATTCTGATCAGTTTCAGAAGAACAACATCTACATAGAAACCCCAGAAGCTTTTGGTGATGGTGGCAAAAACTTCGATGATGATGGACGAATCAAAAGAACTGGTACATGGGTGACTGCAAGTGCTCATATCATAACAGCTGTCATAGGATCTGGAGTGTTATCACTTGCATGGGCAATAGCACAAATGGGTTGGGTGGCTGGCCCTGCTGTTCTCTTTGCCTTCTCTTTTATCACATATTTCACTTCCACTCTTCTTGCTGATTGTTATCGTTCACCTGACCCTGCTCATGGCAAGAGAAACTACACCTATTCTGAGGTTGTCAGAGCTGTCTTAGGAGGGAGGAGATTCCAGCTTTGTGGATTAGCTCAATACATAAATCTTGTCGGTGTTACCATCGGCTACACAATAACTGCTTCAATTAGTATGGTGGCGGTGAAAAGGTCGAACTGTTTTCACAAACATGGTCATCAAGATAAGTGCTACATATCAAACTACCCTTTCATGATCCTCTTTGCTTGCATCCAAATAGTCCTTAGCCAGATACCAAACTTCCACAAGCTTTCATGGCTCTCCATTGTTGCAGCCATCATGTCTTTTGCTTATTCTTCCATTGGCCTTGGGCTCTCCATAGCTAAAGTAGCAGGTGGGGAACATGGACGGACATCCATAACGGGAGTGCAAGTTGGGGTTGATGTTTCAGGAGCCGAGAAGGTGTGGAGGACGTTTCAAGCTATTGGTGACATTGCCTTTGCTTACGCTTATTCTAATGTGCTCATTGAGATACAGGATACCCTGAAATCAAGCCCTCCGGAAAACAAAGTCATGAAAAGAGCAAGCTTGATAGGCATCTTGACCACAACCTTATTTTATATGCTATGTGGCTGCCTAGGTTACGCAGCATTTGGAAATGATGCACCAGGAAATTTCCTCACAGGGTTCGGTTTCTATGAGCCCTTTTGGCTAATAGACTTTGCCAACGTCTGCATAGCCGTGCATTTAGTTGGGGCATATCAGGTCTTCTGCCAGCCCATATTTGGGTTCGTAGAGAGCAAGAGTAAGGAAAGATGGTCCAATAGCCAATTTGTAAATGGAGAGCATGCTGTGAACATCCCACTATGTGGAACCTACTATGTTAACTTCTTCAGGGTGGTGTGGAGAACCACATATGTCATTGTCACTGCTTTGATAGCTATGATATTTCCATTCTTCAATGACTTCCTGGGCCTGATTGGTTCACTGTCCTTTTGGCCTTTAACTGTTTATTTCCCCATAGAGATGTACATTAAGCAGTCCAAGATGCAAAGATTTTCCTTCACGTGGACATGGCTCAAGATATTGAGCTGGGTCTGCTTGATCGTTTCTATTATCTCAGCTGCTGGCTCCATCCAAGGCCTTGCTCAAGATCTTAAGAAATACCAGCCATTCAAAGCTCAGCAATAA 1446 0.4385 MNSDQFQKNNIYIETPEAFGDGGKNFDDDGRIKRTGTWVTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADCYRSPDPAHGKRNYTYSEVVRAVLGGRRFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHQDKCYISNYPFMILFACIQIVLSQIPNFHKLSWLSIVAAIMSFAYSSIGLGLSIAKVAGGEHGRTSITGVQVGVDVSGAEKVWRTFQAIGDIAFAYAYSNVLIEIQDTLKSSPPENKVMKRASLIGILTTTLFYMLCGCLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLVGAYQVFCQPIFGFVESKSKERWSNSQFVNGEHAVNIPLCGTYYVNFFRVVWRTTYVIVTALIAMIFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSKMQRFSFTWTWLKILSWVCLIVSIISAAGSIQGLAQDLKKYQPFKAQQ* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01628 481 FunFam Amino acid permease 6 31 471 - -
Rops10g01628 481 PANTHER OS05G0424000 PROTEIN-RELATED 37 464 - -
Rops10g01628 481 Pfam Transmembrane amino acid transporter protein 34 467 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01628 Rops-Chr10 29888635 29893407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01628 7 479 Organic Solute Cotransporters AT5G49630 76.778 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01628 K24917 - gmx:100777963 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01628 10 29888635 29893407 Rops10g01628 10 29888635 29893407 ECH