Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01613 ATGTTCTCAATTGCAGCTATCAATGATACTGATTCTAAAAGTCAGTGGGAACCACTAGCTCCCACGAAAGAAGCCCAGGAATTTCATCTTTCTCAAACTTATCATGAAGGACTTCTCAAGCTACAAGCAAAAGAATATGAAAAGGCTCGCGAGCTCTTAGAATCTGTCCTTAAAGATCCTCTTATTGCTAATGCTCAGGTGGATAGCAGCGCCAGTGACAGTCATCTATTGCAACTCAGATTTTTGGCATTGAAAAACCTTGCTGCTGTTTTTCTTCAGCAAGGTTCTACACATTATGAGAATGCTCTACACTGTTACCTTCAAGCTGTGGATATTGATTCTAAAGATTCTGTTGTCTGGAACCAGCTGGGAACATTGTCGTGCTCCATGGGCTCACTGAGTATTTCACGTTGGGCATTTGAGCAAGGCCTCTTGTGTAGCCCTAATAACTGGAATTGCATGGAAAAACTTTTGGAAGTTCTTATTGCAATTGGTGATGAGGTTGCTTGCCTTTCTGTCACTGAGTTGATTTTGAGGCACTGGCCATCGCATTCTCGTGCTTTGCATGTTAGAAACACCATTGAAGAATCGGAACCATTGCCATTTGCTCCTAGAGGCATAGACAAATTGGAACCTAAACATGTGCGGCTCAAATTTCCTGACAAGAGAAAAGCTACCGATGAGAGTCTAGATAAGGATGTTGCATCCAAAAAGCTGAAGCAGAACAAAGATCTGCACCTGACAGAAGCTTCCTGGGTGGCTCTTGCTGATGCTCTGCTGGAAATCTTATTGCCATTGAATCCGCACAGTTCTGAGATAGATCCTGAAAAAACATGCAATTCTCCAAACATTAGGCTAAGCATAAACTTACCTTGTAATTCAGAAGCTGTTATGAACACTGTGGAAGTGAAAGGGTTCAATGGTGAAAATAGTGCTTTTGGTGATGGTAATGTAGAACGAGCAAGTGGTTTTAAAGAGAAAGAAGCAAATATCCAAGAAGAGCAGCCACATGAAAGGCGAAGTTCTCGACTTGAAAGGCTCCGGAGTCGTAAACCAGGGAATGATGGACCAGATTCTTCTTGTGGCAAGGACCGTGCGAAGGTTGTCATTCAATATCTAGAATCTTTTATTGCTGGTGGATTGGGTGGTCAAGATACTATTGATAGTGATACCACGACACTATCCAATTTAGGAAATTCTGAATATAATAATGTTTCCACGTTTTTAAGAGAAACTTCAAACAATCATGGTGCTTACCATATGGGGCATTTGCTGTTAGAAGAGGTTGCAAGACAAGGCCTTACATATCAGGATTCTTTTGTCAAATTTCTGGAGTTGGAAAAGTTGACAAGGCATTGGGGGAAGGAGAGAACTGCTGAATGTAGTATTTTTATTGCTGAGCTGTATTATGACTTCGGGTTATGCTCTCCCATTGGTTCTAAACAATCAGAATTTATGTCAGAGACATCTTATCATCTCTGTAAGATCATAGAATCTGTAGCTCTAGATTATCCTTTTCACTTGACTCATGCTTCGAATGAAGGTTGTTTTTTGATTGATAGTTTCCGGGAGACTACTGGAACATCAATAGATAAGTCCACCGAGAGCATTTCACATTTAGACAGCTCAGTTCTGATGAAAAACAGTTCATTTTGGGCTCGATTCTTCTGGCTGAGTGGGAGATTGTCTATTTTTGATGGCAACAGGGCAAAAGCTTGTGAAGAATTTTGTATTGCTTTGTCCCTTTTAGCAAAGAGGGAAGATATGGAACATTCTCTATGTTCAGTTCCCCGCCCACATTGCAAGGCTGTAAAAGAGCTAAACATTGATAGAGTTCTTTATGAAATTAATACATTAAAGGTCAATTTCTTGATGGAAAAGTCTGTCATTCAGATGATGGAACAAGAAAAGTATGTTGAGTGTGTATCCCTGCTTTCTCCACTTCTGTTCTCCACACAGGATGTCTACATCGATTCATTTTCTTTATCCATGGCAGATAAAAAAGATGAAAAGATGACTTCCGTTGAACTCATGGCTCTAGATGTTCTAATAGAAGCATGTCAGAAGATAAGACCAATGGATGTAGAGATGTATTTCAATTGTCATTATAGAAAGCTGAAAATACTTATGGCAATGATGGGGTTGAATAAATGTATTACATCCTTTAAATCTTCTGATCAAACACTTCGTTTGAATGCATCTCCTAATTTTGATATTGATTCAAAGGAAAGTCCTAGCAAGCACTGTAGCCACTTGGTTGCTGAGGAAGTGAAGGCTCTCTCTGACTGTATCTCACAAGTGAAGAAAGTTATTGATTGTCGTGGAGATTTTGATGGCCTTACTGTTCCAACAAGCGGCATTTGTCAAATGCAATCTCTGGTGTTGTTAATCATGAGCTATGTTGCTAACTTACTCGTCTGCAACAAAGCCTCAGCAGAAGTAATTTTCGATCAAGCAGAAAGCAGCTGTTTCGTGGATGCAGCCATTGTTTTCTGCAAACTCCAGCATCTTAGCCCAACCATACCTATAAAAACTCAAGTTGATTTAATTGTTGCAACACATGACTTGCTTGCTGAATATGGGCTTTGCTGTGTGGGTGAAGGTGGAAAAGGTGAAGAAGGAACATTTCTTAGATTTGCAATTAAGCATCTCTTGGCCTTGGATATGAAGCTTAAGTCTAGCTTTAACCTTCTAAATAAAGAATCAGTGCGACGTGAAGAAGTGTCCAGAAACAGTCTTGTCAATGTATCTGTTGCAGATTCAAAATCAGATACATTAGATATCCGAATGGATTGGACCAAAGTTGATGAAAATAATTCTGTGAAAAAGGATGTTTCTGAAGGAATAATATCCAAAGGCATTTCATCTGGCAAAGTTCATGATAAAGACGGCAAGGAAGTAGAGTGTGAAAATCATGGAGATGCAGGGACCGACTGTAAGTTAATTAAGAATGAAAATTCAAGCAATCAATTGATTGAGTGTGGAAATGAACTTTCTGAAGATGAAAGGGAGGAACTTGAGTCTAAAATTGACAGTGCCCTAGATCAGTGCTTCTTCTGTTTATATGGATTAAATCTAAGATCTGATTCGTCTTATGAGGATGATGTAGTGATGCACAAAAATACAAGCCGGGGAGATTATCAGACCAAGGAACAGTGTGCTGATGTTTTCAAGTATGTTCTTCCCTATGCAAAGGCATCTTCTAGGACTGGACTGGTCAAACTTCGTAGAGTTTTGAGAGCTATTAGGAAGCACTTTCTGCAGCCACCAGAGGACCTCTTGGCAGGAAACCCTATAGATAAGTTCCTAGATGATTCTAATGTATGTGAAGATAAACTCTCAGAGGAGGCTGGGTCTGATGGATTTCTTGAAACTATAACTAAGATCATGTTTCCTGATGTGGGAGGTCTTGCACAGTATAACACAATGCTGTTGAGAAGGTCTGAGCCGTATTTGGAGGTCTACCGTAACTTGTATTATTTCTTAGCTTTATCGGAGGAAATGAGTGCAACAGATAAATGGCCTGGATTTGTGCTGACCAAGGAAGGGGAAGAATTTGTTGAACAAAATGCAAAGCTCTTCAAATATGATCTCATATACAATCCTCTGCGCTTTGAAAGCTGGCAGCGACTTGGAAATATTTATGATGAGGAAGTAGATTTATTGCTAAATGATGGTAGCAAGCACATTAATGTAGTAGGATGGAGGAAGAATCCTACTTTATCTGAGAGAGTGGAAACAAGTCGAAGGAGGAGTAGACGGTGCCTACTAATGAGTCTAGCTTTGGCAAAGACACCTGCCCAGCAGTGTGAAATACACGAGCTCTTGGCATTGGTGTACTACGACAGTCTTCAAAATGTAGTCCCATTTTATGATCAGAGATCTGTTTTGCCCTTAAAGGATGCGGCATGGATGATGTTTTGTGAGAACTCAATGAAACATTTTAAAAAAGCCTTCACAATTAAGCAAGATTGGTTGCATGCATTTTACCTGGGTAAACTTAGTGAAAAACTTGGATATTCACATGAAATTGCATTATCATATTACAATAAAGCTATTGCTTTGAACGTATCAGCTGTTGATCCTGTCTATAGGATGCATGCCTCACGCTTGAAGATATTATTTAAGTGCAGAAAACAGAATTTGGAGATTTTGAAGGTTCTTTCAGCAAACTCCTTTAATCAATCTGTAAAAGAAGCTGTCACAAGTATCCTTGGTGGTATGGATAGCTCATTTTTAAATGCAAAGGAGAGATGTAATAATGCCAATTCTGTAGAAACAAAGCATGAAGGGCTGCTCAAATTGGATATGGTATGGTCCATGCTTTACAATGATTGCCTTTCTGCACTTGAAACTTGTGTAGAGGGGGATCTCAAACATTTCCATAAGGCCAGATACATGCTGGCTCAAGGGCTGTATAAAAGGGGTGAGAGTGGTGATATAGAGAAGGCAAAAGATCAACTATCTTTCTGCTTCAAATCTTCACGCTCCTCATTTACAATAAATATGTGGGAAATTGACAGCATGGTAAAGAAAGGAAGGCGCAAGACACCAGGATCTGCTGGGAACAAAAAAGCCCTTGAGGTTAACTTACCAGAAAGTTCACGAAAATTCATTACTTGCATTCGAAAGTATGTGTTGTTTTATCTCGAACTATTGGAAGAGACTGGAGATAGATATATTCTTGAACGTGCATATGTTTCTCTTCGTGGAGATAAGCGGTTTTCATTATGTATTGAAGATCTTGTACCGCTGGCCATTGGAAGATATTTAAAGGCACTGATTACAACTATGTGCCATTCTCAGACTACTGCCTCTGGTTCTGTGAGCAGTTCTGACAATGTGCTGGAGAGAATATTTGCTTTGTTCATGGAGCAAGGGAGCTTATGGCCAGAAATATGCAGCTTGCCCGAAATTGAGAGTCCAGATACATCAGAGAGTATCATATATGGGTATCTTCACGAGCATCTTGTATTATTGGAGAAAAATGGAAAACTGGAAACTCTTGAGGCAATAAATGAGAAGATTCGGAAACGTTTTAAGAATCCAAAGTTCTCAAATGGTAGTTGTGCGAAAGTTTGCAGGCATGCTTCTGTCGCTTGGTGCCGAACTCTTGTATATAATTTGGCACAAATAACTCCTTTATCATGTGGATTCTCAAATGGGATTCAGGTCCTTAATTTGACTGATGGGGGGTTGGATAATAGCCAGTTGCTCTGTATTGATTTGCAACCACATGAATTATGGAATACAGCTTTTGAAGATCCAACTCATTTAGAAAAGATTGAAACAAAATGGAGCCCCATTTTATCAAAAATAAAGAATATAACGATCAAGAAAGCTTCTGATGAAAACTTGGAAACTGCAAACACTTTGCTCAAAGCTTGCTATAATTTTTACCGGGAGAGTTCTTCTGTAGTGCTTACCAGTGGCCTCAACTTTTATTTCATTCCATCTCAATTAGTATCAGAGACACCTTTCAACCCAAGTATGACTGGTATTGAAGCACTTGATTTGAGCATCCCAAGGAAGCTTCTCTTGTGGGCCTATGCGCTGTTGCATGGACGTTGTGCAAATATCTCAACTGTTGTTAAGCATTGTGAAGAAATTTCAAAGTCAAAGATGAAAAGAGGAGCTGGAACGTCACCTGCGCTTTCAAACACACCTCCCTCTGCCCCTACTCTTCCAGGTAGTGGTAAAAATGGCCCAAATTCTTCCGGAGGCATTGACGTTGATTCTACAGCGGGGTGCGGTTCATTTCCTGGCAGCAATGCCACTAATTTGATGGATTCACTTTCCTCCGATGAGATTCAAAAGAATCTCTTTGCTTCTCCCCAGTTGCATCATTGTTCTACCAACGAGACAGAGAGAAGCAATTTGATGGCACGTGAAGGAGATACAGAGGGAGATTGA 5913 0.399 MFSIAAINDTDSKSQWEPLAPTKEAQEFHLSQTYHEGLLKLQAKEYEKARELLESVLKDPLIANAQVDSSASDSHLLQLRFLALKNLAAVFLQQGSTHYENALHCYLQAVDIDSKDSVVWNQLGTLSCSMGSLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVTELILRHWPSHSRALHVRNTIEESEPLPFAPRGIDKLEPKHVRLKFPDKRKATDESLDKDVASKKLKQNKDLHLTEASWVALADALLEILLPLNPHSSEIDPEKTCNSPNIRLSINLPCNSEAVMNTVEVKGFNGENSAFGDGNVERASGFKEKEANIQEEQPHERRSSRLERLRSRKPGNDGPDSSCGKDRAKVVIQYLESFIAGGLGGQDTIDSDTTTLSNLGNSEYNNVSTFLRETSNNHGAYHMGHLLLEEVARQGLTYQDSFVKFLELEKLTRHWGKERTAECSIFIAELYYDFGLCSPIGSKQSEFMSETSYHLCKIIESVALDYPFHLTHASNEGCFLIDSFRETTGTSIDKSTESISHLDSSVLMKNSSFWARFFWLSGRLSIFDGNRAKACEEFCIALSLLAKREDMEHSLCSVPRPHCKAVKELNIDRVLYEINTLKVNFLMEKSVIQMMEQEKYVECVSLLSPLLFSTQDVYIDSFSLSMADKKDEKMTSVELMALDVLIEACQKIRPMDVEMYFNCHYRKLKILMAMMGLNKCITSFKSSDQTLRLNASPNFDIDSKESPSKHCSHLVAEEVKALSDCISQVKKVIDCRGDFDGLTVPTSGICQMQSLVLLIMSYVANLLVCNKASAEVIFDQAESSCFVDAAIVFCKLQHLSPTIPIKTQVDLIVATHDLLAEYGLCCVGEGGKGEEGTFLRFAIKHLLALDMKLKSSFNLLNKESVRREEVSRNSLVNVSVADSKSDTLDIRMDWTKVDENNSVKKDVSEGIISKGISSGKVHDKDGKEVECENHGDAGTDCKLIKNENSSNQLIECGNELSEDEREELESKIDSALDQCFFCLYGLNLRSDSSYEDDVVMHKNTSRGDYQTKEQCADVFKYVLPYAKASSRTGLVKLRRVLRAIRKHFLQPPEDLLAGNPIDKFLDDSNVCEDKLSEEAGSDGFLETITKIMFPDVGGLAQYNTMLLRRSEPYLEVYRNLYYFLALSEEMSATDKWPGFVLTKEGEEFVEQNAKLFKYDLIYNPLRFESWQRLGNIYDEEVDLLLNDGSKHINVVGWRKNPTLSERVETSRRRSRRCLLMSLALAKTPAQQCEIHELLALVYYDSLQNVVPFYDQRSVLPLKDAAWMMFCENSMKHFKKAFTIKQDWLHAFYLGKLSEKLGYSHEIALSYYNKAIALNVSAVDPVYRMHASRLKILFKCRKQNLEILKVLSANSFNQSVKEAVTSILGGMDSSFLNAKERCNNANSVETKHEGLLKLDMVWSMLYNDCLSALETCVEGDLKHFHKARYMLAQGLYKRGESGDIEKAKDQLSFCFKSSRSSFTINMWEIDSMVKKGRRKTPGSAGNKKALEVNLPESSRKFITCIRKYVLFYLELLEETGDRYILERAYVSLRGDKRFSLCIEDLVPLAIGRYLKALITTMCHSQTTASGSVSSSDNVLERIFALFMEQGSLWPEICSLPEIESPDTSESIIYGYLHEHLVLLEKNGKLETLEAINEKIRKRFKNPKFSNGSCAKVCRHASVAWCRTLVYNLAQITPLSCGFSNGIQVLNLTDGGLDNSQLLCIDLQPHELWNTAFEDPTHLEKIETKWSPILSKIKNITIKKASDENLETANTLLKACYNFYRESSSVVLTSGLNFYFIPSQLVSETPFNPSMTGIEALDLSIPRKLLLWAYALLHGRCANISTVVKHCEEISKSKMKRGAGTSPALSNTPPSAPTLPGSGKNGPNSSGGIDVDSTAGCGSFPGSNATNLMDSLSSDEIQKNLFASPQLHHCSTNETERSNLMAREGDTEGD* 1971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01613 1970 MobiDBLite consensus disorder prediction 328 362 - -
Rops10g01613 1970 MobiDBLite consensus disorder prediction 1875 1916 - -
Rops10g01613 1970 Gene3D Tetratricopeptide repeat domain 6 194 IPR011990 GO:0005515
Rops10g01613 1970 Coils Coil 1659 1679 - -
Rops10g01613 1970 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1958 IPR033053 GO:0006325
Rops10g01613 1970 MobiDBLite consensus disorder prediction 1880 1916 - -
Rops10g01613 1970 Coils Coil 996 1016 - -
Rops10g01613 1970 MobiDBLite consensus disorder prediction 1943 1958 - -
Rops10g01613 1970 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 13 198 - -
Rops10g01613 1970 SUPERFAMILY TPR-like 33 169 IPR011990 GO:0005515
Rops10g01613 1970 Coils Coil 39 59 - -
Rops10g01613 1970 MobiDBLite consensus disorder prediction 328 363 - -
Rops10g01613 1970 MobiDBLite consensus disorder prediction 1943 1970 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01613 K17613 - gmx:100783154 3285.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01613 10 29703453 29717927 Rops10g01613 10 29703453 29717927 ECH