Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01610 ATGGCGTCGAGCGATTCTGATTCGCAGTTGAAGATCGTCCATGGCGAGGCTGGTTACATACTCGAAGACGTTCCTCACTTCTCCGACTATTTTCCAAATCTTCCTACATATCCAAATCCACTGCGATCCAATCCAGCTTACTCGGTTGTTAAGCAGTATTTTGTGCACATGGATGACACCGTTCCTCAAAAGGTTGTTGTTCATAAGGATAGTCCAAGAGGTGTACATTTTCGACGTGCAGGACCTCGACAAAAGGTATATTTTAACCCGGATGATGTGCATGCATGTATCGTTACGTGTGGTGGTCTCTGCCCTGGCCTCAACACTGTCATAAGGGAAATTGTCTGTGGTCTTTCTTACATGTATGGTGTCAACAAAGTCCTTGGCATAGATGGTGGTTATAGAGGTTTTTATTCCAAGAACACCGTTACTTTGACACCTAAGGTGGTCAATGACATCCATAAGCGGGGGGGAACGATTCTTGGTACATCTCGAGGGGGGCATGATACTGGAAAGATAGTTGACAGCATCCAGGATCGTGGAATTAATCAGGTTTATATTATTGGTGGAGATGGAACACAGAGAGGAGCGGCTGTGATTTATGAGGAAGTTAGACGGCGGGGTCTGAAAGTAGTAATTGCTGGAATTCCTAAAACAATAGATAATGACATCCCGGTTATTGACAAGTCCTTTGGTTTTGACACTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCAGCACATGTTGAAGCAGAAAGTTTTGAGAATTGCATTGGTGTTGTCAAGCTAATGGGTCGTTATTGTGGTTTTATTGCAATGTATGCTACTCTTGCTAGCAGAGATGTTGACTGTTGCTTGATTCCAGAGTCACCCTTCTACCTTGAAGGAAAGGGTGGACTTTTTGAATTTATTGAGAAAAGGCTGAACGAAAATGGACATATGGTTATAGTCATAGCTGAGGGAGCAGGACAAGATATTCTTACAGAAAGCATGCAAACCATGAACCAGACGGATGCTTCTGGAAACAAGCTACTTCAAGACGTTGGTTTATGGTTATCTCATAAGATCAAGGATCATTTTGCAAGGAAAAATAAGATGGCCATCAATCTTAAATATATAGATCCAACATACATGATCCGGGCAATTCCAAGCATTGCCTCAGACAATGTCTACTGCACACTTCTTGCTCAGAGTGCCGTTCATGGTGCAATGGCAGGGTATACTGGATTCACAGTAGGGCTGGTCAATGGCAGACAAACTTATATTCCATTCAACAGAATCATCGAGAAGCAGAACAAGGTTGTGATTACTGACAGGATGTGGGCAAGGCTTCTTTCTTCAACCAACCAGCCAAGCTTTTTGGACCCCAAAAATGTTGAAGCCAAGAAAGAACAACCTTCTACTCAGTTGTTAGAAGGGGACAATCTCAAAGATGAACAAGAATCAGGAAACCATGCTGACAATGGTATCAAGACAGAAAATTAG 1485 0.4303 MASSDSDSQLKIVHGEAGYILEDVPHFSDYFPNLPTYPNPLRSNPAYSVVKQYFVHMDDTVPQKVVVHKDSPRGVHFRRAGPRQKVYFNPDDVHACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVLGIDGGYRGFYSKNTVTLTPKVVNDIHKRGGTILGTSRGGHDTGKIVDSIQDRGINQVYIIGGDGTQRGAAVIYEEVRRRGLKVVIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESFENCIGVVKLMGRYCGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLNENGHMVIVIAEGAGQDILTESMQTMNQTDASGNKLLQDVGLWLSHKIKDHFARKNKMAINLKYIDPTYMIRAIPSIASDNVYCTLLAQSAVHGAMAGYTGFTVGLVNGRQTYIPFNRIIEKQNKVVITDRMWARLLSSTNQPSFLDPKNVEAKKEQPSTQLLEGDNLKDEQESGNHADNGIKTEN* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01610 494 Gene3D - 89 279 - -
Rops10g01610 494 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 5 460 - -
Rops10g01610 494 MobiDBLite consensus disorder prediction 453 494 - -
Rops10g01610 494 PRINTS ATP-dependent phosphofructokinase family signature 181 197 IPR022953 GO:0003872|GO:0006002|GO:0006096
Rops10g01610 494 PRINTS ATP-dependent phosphofructokinase family signature 232 250 IPR022953 GO:0003872|GO:0006002|GO:0006096
Rops10g01610 494 PRINTS ATP-dependent phosphofructokinase family signature 214 231 IPR022953 GO:0003872|GO:0006002|GO:0006096
Rops10g01610 494 PRINTS ATP-dependent phosphofructokinase family signature 97 116 IPR022953 GO:0003872|GO:0006002|GO:0006096
Rops10g01610 494 PRINTS ATP-dependent phosphofructokinase family signature 310 322 IPR022953 GO:0003872|GO:0006002|GO:0006096
Rops10g01610 494 PRINTS ATP-dependent phosphofructokinase family signature 253 269 IPR022953 GO:0003872|GO:0006002|GO:0006096
Rops10g01610 494 PIRSF ATP_PFK_TP0108 1 458 IPR012004 GO:0003872|GO:0005524|GO:0006096
Rops10g01610 494 SUPERFAMILY Phosphofructokinase 28 455 IPR035966 GO:0003872|GO:0006096
Rops10g01610 494 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 24 454 IPR012004 GO:0003872|GO:0005524|GO:0006096
Rops10g01610 494 MobiDBLite consensus disorder prediction 474 494 - -
Rops10g01610 494 FunFam ATP-dependent 6-phosphofructokinase 89 279 - -
Rops10g01610 494 Pfam Phosphofructokinase 96 401 IPR000023 GO:0003872|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01610 Rops-Chr10 29685120 29692048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01610 K00850 - gmx:100803139 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01610 10 29685120 29692048 Rops10g01610 10 29685120 29692048 ECH