Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01607 ATGGACACTGAAGCAGATAATAAGGGTGTTTCTAGGACACACTCAGGTACGGAACTGGACGATGATGGGAGAACCAAAAGAACCGGGAACGTGGTGACAGCTACCACGCACATAATAACCGTGGTGGTGGGGGCAGGAGTGCTGGCTCTGGCATGGGCGATAGCTCAATACCCAAAACCTGATAGTGGCAAGAGGAACTACACTTACATGCAGGCCGTCGAATCATACCTAGGTGGAACAATGTACGTGTTTTGTGGATTAGTCCAATATGGGAAGATCGCAGGGGTTACCGTGGGCTACACTATAACTACTTCTACAAGCTTGGTGGCTATAAAGAAAGCTATTTGCTTCCATAAAAAAGGCCATGAAGCTTATTGCAAGTTTTCAAATAATCCCTATATGATCGGTTTCGGGATCGTGCAAATTATATTGTCTCAAATCCCAAATTTCCATAAGTTGACAGCTCTTTCAACCATGGCTTGTATTTCCTCTTTTGGTTATGCACTCATTGGAAGTGGGCTTTCTCTGTCAGTCGTGATCTCTGGGAAAGGAGAAGCAACCAGATTATTTGGAAACAAAATAGGGCCAGAACTATCTGGAGCAGATAAAGTTTGGAGGGTTTTTAGTGCTTTGGGAAACATTGCACTTGCTTGCTCTTATGCTACTGTTGTATATGATATAATGGACACATTAAAGTCATATCCACCTGAATGCAAACAGATGAGAAAGGCAAATGTATTGGGGATCATAGCAATGACAATACTTTTCCTCCTATGCGGCTGTCTTGGCTATGCTGCTTTCGGTGACCACACACCCGGGAACATCCTCACTGGCTTTGGATTTTATGAGCCCTTCTGGTTGGTCGCCCTGGGAAATGTGTGCATTATAATCCACATGGTGGGAGCATATCAGGTGCTTGCTCAGTCATTGTTCCGTATCGTTGAGATGGGTGCTAACATAGTGTGGTCACGTTCAGCTTTCATAAACAAGGAATACCAAACCAAAATGGGCTCCATAACATTCAGCATCAACTTGTTTAGGCTTACTTGGAGGACCATATACGTGGTAGTGGCCACAATTATTGCCATGGCGATGCCATTTTTCAATGAGTTTCTTGCACTGCTTGGAGCATTTGGGTTTTGGCCACTCATCGTCTTCTTCCCCATACAAATGCACATTGCACAGAAACAGCTAAAAAGACTATCATTGAAGTGGTGCATGCTCCAACTATTGAGCTTTGTGTGCTTCCTCATTTCAGCAGCCGCAACAGTTGGTTCCATTCACGGAATTAGCAAGAATATCAGCAAATACAAACTCTTCATGAAGGAGGAAATGGAAGTGGAATCCTGTGTAACTGCTGTTTCAAGTGCTCTTCTGGACGATGATGGGAAACCCAAGAGAACTGGGACCGTGTGGACTGCAAGTGCACATATCATAACGGCAGTGATTGGGGCTGGGGTGCTGTCTCTGGCATGGGCCATGGCGCAGTTGGGATGGATCCTTGGCATATCAAGTATCATTATCTTTGCCGGTGTTACGCTCTTCACTTCAAATCTTCTAGCTGATTGTTATAGATCACCTGATCCTGTTACTGGCAAGAGGAACTACACTTACATGGACGCTGTCAAAACTCACTTAGGTGGAAAAAAGCATGTGTTCTGTGGATTGGTCCAGTATGGCAACCTTGCTGGGTTTGCAGTTAGCTTCACAATAATTACATCTAAAAGTGTGGTGGCGATACTGAAAAACAATTGCTTCCACAAGAATGGGACTGGAGCTCCATGCCATTTCTCTAATAACCCGTACATGATTATTCTGGGAATCATTGAAATTATTTTGTCTCAAATCCGCAATTTTCATAAGCTGTCTTGGCTCTCAATCTTAGCAGCTATTACGTCTTTTGGGTACGCATCCATTGGTTTCGGACTTTCTCTTGCAACCATTATCCAAGGGAAGGGAAGAAGTACCTCATTGTGGGGGAGCAGCAATGGACAGAGTTCATCGGAGAGATTGTGGAATATGTTGGTTGCACTTGGAGACGTTGCACTTGCCAGTGCCTATGCTCAAATTGCATTAGATATACAGGATAGTTTGAAGTCATCACCACCAGAAAATCAAGTAATGAAGAGGGCAAACAGGATAGGTATATTCACAATGACAATTATCTTCCTACTCTCAGCATGTTCCGGATATGCAGCATTTGGGTCATACACTCCTGGCAGCATTCTCATGAGCTCTGGCTTTCACAACCCTTTCTGGCTAGTGGACTTAGCCAATGTCTTCGTTCTAGTGCATCTGGTTGGAGCATATCAGGTAATAATCCAACCTTTTTATCGTATAGTTGAAACGTTGGCTGCACAAAGGTGGCCAAAGTCAAGTTTCATAACAGGGGAGAAACCTGTGAGCATTGCCAAAATGAAATTCAGCATAAATTTTTTCAGGCTAGTTTGGAGGTCCATATTTGTGGCGATAGTGACTGTACTGGCCATGGCAATGCCCTTTTTCAATGACATGATTGCCCTTCTGGGGGCCATTGGGTTCTGGCCTTCAGTAGTATATTTTCCAATAGAGATGTTCATTGCCAAACATAAGACCAAAAAAAGAACAATTCGATGGTTTGGACTTCAAATGTTGAGCTTCTTTTGCCTGCTTGTGTCCTTGGCTGCAGCATGTGGAGCTATTCATGGGTTGGGAAAATCTATTAGTAAATACAAACCCTTTATGTATAAGGAATAG 2736 0.4364 MDTEADNKGVSRTHSGTELDDDGRTKRTGNVVTATTHIITVVVGAGVLALAWAIAQYPKPDSGKRNYTYMQAVESYLGGTMYVFCGLVQYGKIAGVTVGYTITTSTSLVAIKKAICFHKKGHEAYCKFSNNPYMIGFGIVQIILSQIPNFHKLTALSTMACISSFGYALIGSGLSLSVVISGKGEATRLFGNKIGPELSGADKVWRVFSALGNIALACSYATVVYDIMDTLKSYPPECKQMRKANVLGIIAMTILFLLCGCLGYAAFGDHTPGNILTGFGFYEPFWLVALGNVCIIIHMVGAYQVLAQSLFRIVEMGANIVWSRSAFINKEYQTKMGSITFSINLFRLTWRTIYVVVATIIAMAMPFFNEFLALLGAFGFWPLIVFFPIQMHIAQKQLKRLSLKWCMLQLLSFVCFLISAAATVGSIHGISKNISKYKLFMKEEMEVESCVTAVSSALLDDDGKPKRTGTVWTASAHIITAVIGAGVLSLAWAMAQLGWILGISSIIIFAGVTLFTSNLLADCYRSPDPVTGKRNYTYMDAVKTHLGGKKHVFCGLVQYGNLAGFAVSFTIITSKSVVAILKNNCFHKNGTGAPCHFSNNPYMIILGIIEIILSQIRNFHKLSWLSILAAITSFGYASIGFGLSLATIIQGKGRSTSLWGSSNGQSSSERLWNMLVALGDVALASAYAQIALDIQDSLKSSPPENQVMKRANRIGIFTMTIIFLLSACSGYAAFGSYTPGSILMSSGFHNPFWLVDLANVFVLVHLVGAYQVIIQPFYRIVETLAAQRWPKSSFITGEKPVSIAKMKFSINFFRLVWRSIFVAIVTVLAMAMPFFNDMIALLGAIGFWPSVVYFPIEMFIAKHKTKKRTIRWFGLQMLSFFCLLVSLAAACGAIHGLGKSISKYKPFMYKE* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01607 911 PANTHER OS05G0424000 PROTEIN-RELATED 469 894 - -
Rops10g01607 911 MobiDBLite consensus disorder prediction 1 26 - -
Rops10g01607 911 Pfam Transmembrane amino acid transporter protein 61 429 IPR013057 -
Rops10g01607 911 Pfam Transmembrane amino acid transporter protein 467 894 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01607 Rops-Chr10 29630052 29654033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01607 459 907 Organic Solute Cotransporters AT1G58360 54.867 1.47e-176 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01607 K24917 - gmx:100802090 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01607 10 29630052 29654033 Rops10g01607 10 29630052 29654033 ECH