Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01601 ATGGACCGTTTGCGTCCTCGAAAAAGAGCTGTCTTTTCTGGATTTACAAGTGCCGAGATCATTGTTATCAGCGAAAAAATGGGTCTTGGAACTATTGAGAAAATGGAGAAATTGCTAAGGGAATCAAAAGAACGATTATTATTGGGCCGGGAATTTTACCAAAAACTCGCCATGAGTTTCAACCGTTCCTCGGGTCGTGCTGGGAAACCTGTTATAAAATGGACAGAGATAGAAAGTTGGTTTCAGACTAGGCTCCAAGACTCACCACAATTCCCTGAAAATGAGTTGATGTTTCCTAAAGGCATTCAGTGTAAGGAAGGAGAAATTATCCAAGACCCATCAGAGTTGGAATTCGAAGCAAGGTCATCAAAAGATGGAGCATGGTATGATGTTGAGGCATTTCTAGCTCACAGATTTCTTAGCACAGGGGAAGCTGAAGTCCATGTCAGATTTGTTGGATTTGGGGCCGAGGAAGATGAGTGGGTCAATATAAAAAGTTCAGTCCGAGAACGTTCTATTCCTTTGGAAAACAATGAGTGTTCCCACCTGAAAGTTGGAGACTCTGTCTTGTGCTTCCAGGAGAGGAGAGATCAAGCAATTTACTATGATGCCCGTGTGGTAGAGATCCAAAGGAGAATGCATGATATCAGAGGGTGCAGATGTCTCATCCTAATTCGGTATGATCATGACAACAGTGAGGAAAGAGTTCGCTTGAGGAGACTTTGCCGCAGACCAAGATCTTAG 744 0.4328 MDRLRPRKRAVFSGFTSAEIIVISEKMGLGTIEKMEKLLRESKERLLLGREFYQKLAMSFNRSSGRAGKPVIKWTEIESWFQTRLQDSPQFPENELMFPKGIQCKEGEIIQDPSELEFEARSSKDGAWYDVEAFLAHRFLSTGEAEVHVRFVGFGAEEDEWVNIKSSVRERSIPLENNECSHLKVGDSVLCFQERRDQAIYYDARVVEIQRRMHDIRGCRCLILIRYDHDNSEERVRLRRLCRRPRS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01601 247 Pfam SAWADEE domain 115 242 IPR032001 GO:0003682
Rops10g01601 247 Gene3D - 113 174 - -
Rops10g01601 247 Gene3D - 175 247 - -
Rops10g01601 247 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 11 246 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01601 Rops-Chr10 29567469 29572728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01601 - - gmx:100817690 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01601 10 29567469 29572728 Rops10g01601 10 29567469 29572728 ECH