Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01599 ATGATTCAAAACGGTGTGTCGAAGAGCAAGGTGATGCAGGATAATATGCAGGACGTGATGAAGCGAGGAAAGAACATGGGTAAGGCACTGAACAACGCCATGGTGCGTCATCACGAAGCCTTCACGTGCCGTCCACGTGATCCGTACATGTCTTTTGAGTCGCCGTTGGAGTATCAGTTCAGCTGTAGCGGCAGTCCACCACGTCCCTCTCGTGCTCTCAGTAGGAGGAAGCTCTCTCCGGCAACCACCGAGCATGGACGACGGTCACTGAGGCTGTGTCGTGGCACCGCCGACGACGCTTTGCGGAGGCGCGTTAAAACCACGGGATCCGCTGCTTCGTTGCTTAACGACAGGGAAAAGGAGTTGCACGTGGACCAGGCGGCGGAGGAGTTCATAGAGAGGTTTTACAGAGAGTTACGGTTGCAGAAATGGTTGGATCATTATTGA 447 0.5414 MIQNGVSKSKVMQDNMQDVMKRGKNMGKALNNAMVRHHEAFTCRPRDPYMSFESPLEYQFSCSGSPPRPSRALSRRKLSPATTEHGRRSLRLCRGTADDALRRRVKTTGSAASLLNDREKELHVDQAAEEFIERFYRELRLQKWLDHY* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01599 148 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 145 - -
Rops10g01599 148 MobiDBLite consensus disorder prediction 63 87 - -
Rops10g01599 148 Pfam Cotton fibre expressed protein 123 143 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01599 Rops-Chr10 29551355 29551801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01599 - - gmx:102661306 180.259