Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01598 ATGGCAGAGGAATCTAAACCAAAATGGGAAGGTAAAGCCATTGTTGAGCTACAAGGCATCGATGCAGAACAAGTATGGCCCGTGTTAGAGGATTTCTGCAACTTACACAAGTGGATCCCCCTTGACACTTGTTACCAAGTAGAGGGTATTCATGGTCAACCTGGTCTCATTCGTTACTGTGCTTCCACCGTTAAAGGGGTTTCTGATGCTGAGACAACCATCACGTGGGTCAAAGAGAAGCTACTCTCAATCGATCCCGTCCAACGTTGTTTGTCCTATGAAGTTCTTGATAACAACGCGGGGTTTAAGTTTTATGTGGGCACATTCAAAGTACTGCCAATCAACGGGGATGATGATAAATCGGGGTGTAAGATTGAATGGGGGTTTGTTTGTGATCCTGTGGAAGGGTGGACATTTCAAGATTTGATCTCTTATATTGAGTACTCTCTTCAGTTTATGGCCAAGAAGATTGAGCTTGCATGCTCTGTACCTGACAAGGAGTCTGGGATCTGA 513 0.4464 MAEESKPKWEGKAIVELQGIDAEQVWPVLEDFCNLHKWIPLDTCYQVEGIHGQPGLIRYCASTVKGVSDAETTITWVKEKLLSIDPVQRCLSYEVLDNNAGFKFYVGTFKVLPINGDDDKSGCKIEWGFVCDPVEGWTFQDLISYIEYSLQFMAKKIELACSVPDKESGI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01598 170 SUPERFAMILY Bet v1-like 20 158 - -
Rops10g01598 170 PANTHER LACHRYMATORY-FACTOR SYNTHASE 1 161 - -
Rops10g01598 170 Gene3D - 2 167 IPR023393 -
Rops10g01598 170 FunFam Lachrymatory-factor synthase 2 162 - -
Rops10g01598 170 Pfam Polyketide cyclase / dehydrase and lipid transport 20 150 IPR019587 -
Rops10g01598 170 CDD PYR_PYL_RCAR_like 21 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01598 Rops-Chr10 29531533 29532291 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01598 - - gmx:100798368 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01598 10 29531533 29532291 Rops10g01598 10 29531533 29532291 ECH