Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01597 ATGTCTTCCGGCGAGACGACGATGGAGCCATTGACATCGGGGGCTAGCAACCGCATAATTCCGATTCTGAAAGCCCTAAGGGCTTCTCTGTTTTTCGTTTACACCTTCTTTCTCTCCTTCCTCTTGTTTGTTCTCCCCCGCCTCTCCTCGCCGGCGTCAGCGCCGTCATCTCCGAGGAAGCATTTGAAGCGCCGGTGGTTGGTTCGTGAGGAAGAGGATGCCTTCAGGAGAAGAGCTTTGGCGCAAGACGTGGGTATGGGACGCGACGATGGTTGTTACCGGTGGAACACTTCTATCTTCTATGGTGTTAGAAACAACGCTCTCTTTTGCCGGTCTTGGTTTCCGGTCACCGGTGATCTTAAGGGCATTCTGATCATCATTCACGGGCTTAATGAACACAGTGGAAGATATGCAGACTTTGCAAGGCAATTAACATCGTGTAACTTTGGTGTCTATGCAATGGACTGGATAGGTCATGGTGGCAGTGATGGATTGCATGGTTATGTTCCTTCTCTTGATCATGTGGTTGGAGACACAGGGGCTTTCTTGGAAAAAATTAAATCAGAGAATCCTGGGATACCATGCTTCCTCTTCGGTCACTCTACTGGAGGGGCTGTGGTTTTGAAAGCGGCTTCCCACCCTCATATTGAAGTAATGGTGGAAGGAATTATATTAACCTCACCAGCTTTGCGTGTGAAGCCAGCTCATCCAATTGTTGGTGCTGTTGCTCCCATTTTTTCTCTGGTAGCTCCAAGGTTGCAATTTAAAGGAGCAAACAAAAGGGGCATTCCAGTTTCAAGGGATCCAGCTGCTTTGTTGGCAAAGTACTCTGATCCTTTGGTCTACACAGGACCTATAAGAGTCCGAACTGGCCATGAAATATTGCGGATATCCTCTTACTTAACACGAAACTTCAAGTCTGTGACAGTACCGTTCTTTGTCTTGCATGGAACTGCTGATAAGGTAACTGATCCACTGGCCTCACAAGATCTATACAACAAGGCAGCTTCAGAGTTCAAAGACATAAAGCTTTATGATGGCTTCTTACACGACCTTCTGTTTGAGCCTGAGCGAGAAGAGATAGCTCAGGACATTATCAACTGGATGGAGAAGAGATTATTTACCATTTGA 1131 0.4695 MSSGETTMEPLTSGASNRIIPILKALRASLFFVYTFFLSFLLFVLPRLSSPASAPSSPRKHLKRRWLVREEEDAFRRRALAQDVGMGRDDGCYRWNTSIFYGVRNNALFCRSWFPVTGDLKGILIIIHGLNEHSGRYADFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVGDTGAFLEKIKSENPGIPCFLFGHSTGGAVVLKAASHPHIEVMVEGIILTSPALRVKPAHPIVGAVAPIFSLVAPRLQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFFVLHGTADKVTDPLASQDLYNKAASEFKDIKLYDGFLHDLLFEPEREEIAQDIINWMEKRLFTI* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01597 376 Pfam Serine aminopeptidase, S33 120 357 IPR022742 -
Rops10g01597 376 Gene3D alpha/beta hydrolase 94 373 IPR029058 -
Rops10g01597 376 FunFam Monoglyceride lipase 94 373 - -
Rops10g01597 376 PANTHER PHOSPHOLIPASE-RELATED 104 372 - -
Rops10g01597 376 SUPERFAMILY alpha/beta-Hydrolases 105 373 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01597 Rops-Chr10 29524893 29528972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01597 1 293 Acyl Lipid Metabolism Gene Families AT5G11650 68.543 2.10e-133 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01597 - - gmx:100816265 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01597 10 29524893 29528972 Rops10g01597 10 29524893 29528972 ECH